REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0082AL215_1_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0082  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1bol 
ATOM      1  N   PHE     1      32.547  43.788   4.134  1.00  0.00              
ATOM      2  CA  PHE     1      32.411  43.229   2.800  1.00  0.00              
ATOM      3  C   PHE     1      31.308  42.223   3.054  1.00  0.00              
ATOM      4  O   PHE     1      31.531  41.090   3.478  1.00  0.00              
ATOM      5  N   ASP     2      30.089  42.715   2.826  1.00  0.00              
ATOM      6  CA  ASP     2      28.826  42.033   3.056  1.00  0.00              
ATOM      7  C   ASP     2      28.380  40.834   2.251  1.00  0.00              
ATOM      8  O   ASP     2      27.460  40.163   2.691  1.00  0.00              
ATOM      9  N   SER     3      28.989  40.554   1.111  1.00  0.00              
ATOM     10  CA  SER     3      28.666  39.432   0.234  1.00  0.00              
ATOM     11  C   SER     3      29.882  38.494   0.356  1.00  0.00              
ATOM     12  O   SER     3      30.984  38.966   0.056  1.00  0.00              
ATOM     13  N   PHE     4      29.799  37.216   0.746  1.00  0.00              
ATOM     14  CA  PHE     4      30.971  36.345   0.918  1.00  0.00              
ATOM     15  C   PHE     4      30.843  35.121   0.014  1.00  0.00              
ATOM     16  O   PHE     4      29.730  34.559  -0.049  1.00  0.00              
ATOM     17  N   TRP     5      31.873  34.650  -0.707  1.00  0.00              
ATOM     18  CA  TRP     5      31.675  33.433  -1.499  1.00  0.00              
ATOM     19  C   TRP     5      32.585  32.357  -0.929  1.00  0.00              
ATOM     20  O   TRP     5      33.742  32.630  -0.530  1.00  0.00              
ATOM     21  N   PHE     6      32.011  31.139  -0.829  1.00  0.00              
ATOM     22  CA  PHE     6      32.735  29.958  -0.336  1.00  0.00              
ATOM     23  C   PHE     6      33.179  29.204  -1.588  1.00  0.00              
ATOM     24  O   PHE     6      32.320  28.698  -2.324  1.00  0.00              
ATOM     25  N   VAL     7      34.479  29.137  -1.880  1.00  0.00              
ATOM     26  CA  VAL     7      34.974  28.463  -3.089  1.00  0.00              
ATOM     27  C   VAL     7      35.601  27.119  -2.743  1.00  0.00              
ATOM     28  O   VAL     7      36.630  27.065  -2.056  1.00  0.00              
ATOM     29  N   GLN     8      34.996  26.044  -3.214  1.00  0.00              
ATOM     30  CA  GLN     8      35.425  24.681  -2.938  1.00  0.00              
ATOM     31  C   GLN     8      35.820  23.987  -4.205  1.00  0.00              
ATOM     32  O   GLN     8      35.222  24.232  -5.258  1.00  0.00              
ATOM     33  N   GLN     9      36.777  23.070  -4.186  1.00  0.00              
ATOM     34  CA  GLN     9      37.141  22.450  -5.453  1.00  0.00              
ATOM     35  C   GLN     9      37.218  20.928  -5.394  1.00  0.00              
ATOM     36  O   GLN     9      37.233  20.336  -4.308  1.00  0.00              
ATOM     37  N   TRP    10      37.234  20.275  -6.551  1.00  0.00              
ATOM     38  CA  TRP    10      37.312  18.834  -6.663  1.00  0.00              
ATOM     39  C   TRP    10      38.670  18.677  -7.352  1.00  0.00              
ATOM     40  O   TRP    10      38.815  18.752  -8.558  1.00  0.00              
ATOM     41  N   PRO    11      39.731  18.536  -6.556  1.00  0.00              
ATOM     42  CA  PRO    11      41.085  18.325  -7.063  1.00  0.00              
ATOM     43  C   PRO    11      41.427  16.825  -6.873  1.00  0.00              
ATOM     44  O   PRO    11      41.715  16.439  -5.734  1.00  0.00              
ATOM     45  N   PRO    12      41.409  15.886  -7.839  1.00  0.00              
ATOM     46  CA  PRO    12      41.909  14.506  -7.651  1.00  0.00              
ATOM     47  C   PRO    12      43.348  14.472  -7.129  1.00  0.00              
ATOM     48  O   PRO    12      44.260  15.149  -7.600  1.00  0.00              
ATOM     49  N   ALA    13      43.506  13.668  -6.094  1.00  0.00              
ATOM     50  CA  ALA    13      44.741  13.492  -5.371  1.00  0.00              
ATOM     51  C   ALA    13      44.763  14.336  -4.102  1.00  0.00              
ATOM     52  O   ALA    13      45.711  14.163  -3.350  1.00  0.00              
ATOM     53  N   VAL    14      43.807  15.241  -3.787  1.00  0.00              
ATOM     54  CA  VAL    14      43.799  16.078  -2.596  1.00  0.00              
ATOM     55  C   VAL    14      42.505  15.888  -1.818  1.00  0.00              
ATOM     56  O   VAL    14      41.408  15.995  -2.392  1.00  0.00              
ATOM     57  N   CYS    15      42.582  15.599  -0.503  1.00  0.00              
ATOM     58  CA  CYS    15      41.431  15.416   0.400  1.00  0.00              
ATOM     59  C   CYS    15      40.660  14.105   0.286  1.00  0.00              
ATOM     60  O   CYS    15      40.965  13.275  -0.560  1.00  0.00              
ATOM     61  N   SER    16      39.634  13.854   1.099  1.00  0.00              
ATOM     62  CA  SER    16      38.881  12.596   1.104  1.00  0.00              
ATOM     63  C   SER    16      38.162  12.353  -0.219  1.00  0.00              
ATOM     64  O   SER    16      37.897  13.308  -0.967  1.00  0.00              
END
