PFRMAT SS 
TARGET T0084 
AUTHOR 7936-3040-4355 
REMARK ---------------------------- 
METHOD Secondary structure prediction by bootstrapping a multiple 
METHOD sequence alignment (using a home-grown multiple sequence 
METHOD alignment method involving intermediate sequences) and getting 
METHOD a prediction from three different methods and taking the consensus. 
REMARK ---------------------------- 
MODEL 1 
C C 1.0 
G C 1.0 
G C 1.0 
R C 1.0 
E H 1.0 
G H 1.0 
V H 1.0 
L H 1.0 
K H 1.0 
K H 1.0 
L H 1.0 
R H 1.0 
A H 1.0 
V H 1.0 
E H 1.0 
N H 1.0 
E H 1.0 
L H 1.0 
H C 0.7 
Y C 0.7 
N H 0.7 
K H 1.0 
S H 1.0 
L H 1.0 
L H 1.0 
E H 1.0 
E H 1.0 
V H 1.0 
K H 1.0 
D H 1.0 
E H 1.0 
L H 1.0 
Q H 1.0 
K C 0.7 
M C 1.0 
R C 1.0 
Q C 1.0 
END 
