PFRMAT AL 
TARGET T0044 
AUTHOR 7169-6295-1599 
METHOD We paid attention on the submitter's remark, saying the secondary structure 
METHOD predition was quite accurate. Therefore we believed the structure of T0044 
METHOD was an irregular alpha/beta type. Furthermore we took into account the 
METHOD functional similarity: ATP-binding might be required to the parent 
METHOD structure. The structure search by the results of the secondary structure 
METHOD prediction against PDB rel. 83 was carried out. The structure of 1atiA was 
METHOD the best one, and it has the ATP-binding site. Its similar fold (1asyA) got 
METHOD relatively higher position by threading. 
MODEL 2 
PARENT 1ATI_A 
L   8 S   4  
D   9 L   5  
G  10 D   6  
A  11 E   7  
Q  12 L   8  
G  13 V   9  
E  14 A  10  
G  15 L  11  
G  16 C  12  
G  17 K  13  
Q  18 R  14  
I  19 R  15  
L  20 G  16  
R  21 F  17  
S  22 I  18  
A  23 F  19  
L  24 Q  20  
S  25 S  21  
L  26 S  22  
S  27 E  23  
M  28 I  24  
I  29 Y  25  
T  30 G  26  
G  31 G  27  
Q  32 L  28  
P  33 Q  29  
F  34 G  30  
T  35 V  31  
I  36 Y  32  
T  37 D  33  
S  38 Y  34  
R  40 G  35  
A  41 P  36  
G  42 L  37  
R  43 G  38  
A  44 V  39  
K  45 E  40  
G  47 L  41  
L  49 K  42  
R  50 N  43  
Q  51 N  44  
H  52 L  45  
L  53 K  46  
T  54 Q  47  
A  55 A  48  
V  56 W  49  
K  57 W  50  
A  58 R  51  
A  59 R  52  
T  60 N  53  
E  61 V  54  
I  62 Y  55  
C  63 E  56  
G  64 R  57  
A  65 D  58  
T  66 D  59  
V  67 M  60  
E  68 E  61  
G  69 G  62  
A  70 L  63  
E  71 D  64  
L  72 A  65  
G  73 S  66  
S  74 V  67  
Q  75 L  68  
R  76 T  69  
L  77 H  70  
L  78 R  71  
F  79 L  72  
R  80 V  73  
P  81 L  74  
G  82 H  75  
T  83 Y  76  
V  84 S  77  
R  85 G  78  
G  86 H  79  
G  87 E  80  
D  88 A  81  
Y  89 T  82  
R  90 F  83  
F  91 A  84  
A  92 D  85  
I  93 P  86  
G  94 M  87  
S  95 V  88  
A  96 D  89  
G  97 N  90  
S  98 W 159  
C  99 T 160  
T 100 P 161  
L 101 P 162  
V 102 R 163  
L 103 Y 164  
Q 104 F 165  
T 105 N 166  
L 107 M 167  
P 108 M 168  
A 109 F 169  
L 110 Q 170  
W 111 D 171  
F 112 L 172  
A 113 R 173  
D 114 G 174  
G 115 P 175  
P 116 R 176  
S 117 G 177  
V 119 G 178  
E 120 R 179  
V 121 G 180  
S 122 L 181  
G 123 L 182  
G 124 A 183  
T 125 Y 184  
D 126 L 185  
N 127 R 186  
P 128 P 187  
S 129 E 188  
A 130 T 189  
P 131 A 190  
P 132 Q 191  
A 133 G 192  
D 134 I 193  
F 135 F 194  
I 136 V 195  
R 137 N 196  
R 138 F 197  
V 139 K 198  
L 140 N 199  
E 141 V 200  
P 142 L 201  
L 143 D 202  
L 144 A 203  
A 145 T 204  
K 146 S 205  
I 147 R 206  
G 148 K 207  
I 149 L 208  
H 150 G 209  
Q 151 F 210  
Q 152 G 211  
T 153 I 212  
T 154 A 213  
L 155 Q 214  
L 156 I 215  
R 157 G 216  
H 158 K 217  
G 159 A 218  
Y 161 F 219  
P 162 R 220  
A 163 N 221  
G 164 E 222  
G 165 I 223  
G 166 T 224  
V 167 P 225  
V 168 R 226  
A 169 N 227  
P 174 F 228  
V 175 I 229  
A 176 F 230  
S 177 R 231  
F 178 V 232  
N 179 R 233  
L 181 E 234  
Q 182 F 235  
L 183 E 236  
G 184 Q 237  
E 185 M 238  
R 186 E 239  
G 187 I 240  
N 188 E 241  
I 189 Y 242  
V 190 F 243  
Q 191 V 244  
M 192 R 245  
R 193 P 246  
G 194 G 247  
E 195 E 248  
V 196 D 249  
L 197 E 250  
L 198 Y 251  
A 199 W 252  
G 200 H 253  
V 201 R 254  
P 202 Y 255  
R 203 W 256  
H 204 V 257  
V 205 E 258  
A 206 E 259  
E 207 R 260  
R 208 L 261  
E 209 K 262  
I 210 W 263  
A 211 W 264  
T 212 Q 265  
L 213 E 266  
A 214 M 267  
G 215 G 268  
S 216 L 269  
F 217 S 270  
S 218 R 271  
L 219 E 272  
H 220 N 273  
E 221 L 274  
Q 222 V 275  
N 223 P 276  
I 224 Y 277  
H 225 Q 278  
N 226 Q 279  
L 227 P 280  
P 228 P 281  
R 229 E 282  
D 230 S 283  
Q 231 S 284  
G 232 A 285  
P 233 H 286  
G 234 Y 287  
N 235 A 288  
T 236 K 289  
V 237 A 290  
S 238 T 291  
L 239 V 292  
E 240 D 293  
V 241 I 294  
E 242 L 295  
S 243 Y 296  
E 244 R 297  
N 245 F 298  
I 246 P 299  
T 247 H 300  
E 248 G 301  
R 249 S 302  
F 250 L 303  
F 251 E 304  
V 252 L 305  
V 253 E 306  
G 254 G 307  
E 255 I 308  
K 256 A 309  
R 257 Q 310  
V 258 R 311  
S 259 T 312  
A 260 D 313  
E 261 F 314  
V 262 D 315  
V 263 L 316  
A 264 G 317  
A 265 S 318  
Q 266 H 319  
L 267 T 320  
V 268 K 321  
K 269 D 322  
E 270 Q 323  
V 271 E 324  
K 272 A 325  
R 273 L 326  
Y 274 G 327  
L 275 I 328  
A 276 T 329  
S 277 A 330  
T 278 R 331  
A 279 V 332  
A 280 L 333  
V 281 R 334  
G 282 N 335  
E 283 E 336  
Y 284 H 337  
L 285 S 338  
A 286 T 339  
D 287 Q 340  
L 289 R 341  
V 290 L 342  
L 291 A 343  
P 292 Y 344  
M 293 R 345  
A 294 D 346  
L 295 P 347  
A 296 E 348  
G 297 T 349  
A 298 G 350  
G 299 K 351  
E 300 W 352  
F 301 F 353  
T 302 V 354  
V 303 P 355  
A 304 Y 356  
H 305 V 357  
P 306 I 358  
S 307 E 359  
C 308 P 360  
H 309 S 361  
L 310 A 362  
L 311 G 363  
T 312 V 364  
N 313 D 365  
I 314 R 366  
A 315 G 367  
V 316 V 368  
V 317 L 369  
E 318 A 370  
R 319 L 371  
F 320 L 372  
L 321 A 373  
P 322 E 374  
V 323 A 375  
R 324 F 376  
F 325 T 377  
S 326 R 378  
L 327 E 379  
E 329 E 380  
T 330 L 381  
D 331 P 382  
G 332 N 383  
V 333 G 384  
T 334 E 385  
E 339 E 386  
G 340 R 387  
S 341 I 388  
H 342 V 389  
H 343 L 390  
H 344 K 391  
H 345 L 392  
H 346 K 393  
H 347 P 394  
TER 
END 
