PFRMAT AL 
TARGET T0053 
AUTHOR 2746-8822-4809 
METHOD SEQFOLD(MSI) IMPLEMENTATION OF FOLD RECOGNITION 
METHOD BASED ON FISCHER AND EISENBERG PROT. SCI. 5, 943, 1996 
METHOD GLOBAL-LOCAL SEQUENCE ALIGNEMENT DRIVEN BY PREDICTED 
METHOD SECONDARY STRUCTURE  
METHOD CONSEQUENTLY - MODELS ARE ALWAYS BASED ON SINGLE SEQUENCE 
METHOD NOVEL SIGNIFICANCE ANALYSIS BASED ON RANDOM ALIGNMENTS  
MODEL 2 
PARENT 2mnr 
Y 90    Y 169   
E 91    P 170   
K 92    A 171   
I 93    L 172   
V 94    D 173   
R 95    Q 174   
E 96    D 175   
V 97    L 176   
Q 98    A 177   
L 99    V 178   
L 100   V 179   
R 101   R 180   
P 102   S 181   
L 103   I 182   
F 104   R 183   
T 105   Q 184   
R 106   A 185   
L 107   V 186   
T 108   G 187   
L 109   D 188   
G 110   D 189   
V 111   F 190   
P 112   G 191   
L 113   I 192   
L 114   M 193   
S 115   V 194   
S 116   D 195   
H 117   Y 196   
N 118   N 197   
D 119   Q 198   
Y 120   S 199   
V 121   L 200   
Q 122   D 201   
L 123   V 202   
M 124   P 203   
Q 125   A 204   
A 126   A 205   
L 127   I 206   
R 128   K 207   
Q 129   R 208   
Q 130   S 209   
M 131   Q 210   
P 132   A 211   
S 133   L 212   
REMARK REF GAP 2 
Q 136   Q 213   
T 137   Q 214   
E 138   E 215   
K 139   G 216   
V 140   V 217   
V 141   T 218   
F 142   W 219   
M 143   I 220   
G 144   E 221   
H 145   E 222   
G 146   P 223   
A 147   T 224   
S 148   L 225   
H 149   Q 226   
H 150   H 227   
A 151   D 228   
F 152   Y 229   
A 153   E 230   
A 154   G 231   
Y 155   H 232   
A 156   Q 233   
C 157   R 234   
L 158   I 235   
D 159   Q 236   
H 160   S 237   
M 161   K 238   
M 162   L 239   
T 163   N 240   
REMARK REF GAP 3 
F 167   V 241   
P 168   P 242   
A 169   V 243   
R 170   Q 244   
REMARK TAR GAP 5 
V 171   L 250   
G 172   G 251   
A 173   P 252   
V 174   E 253   
E 175   E 254   
S 176   M 255   
Y 177   F 256   
P 178   K 257   
E 179   A 258   
V 180   L 259   
D 181   S 260   
I 182   I 261   
REMARK TAR GAP 6 
L 183   M 268   
I 184   P 269   
D 185   D 270   
S 186   A 271   
L 187   M 272   
R 188   K 273   
D 189   I 274   
E 190   G 275   
G 191   G 276   
V 192   V 277   
T 193   T 278   
G 194   G 279   
REMARK TAR GAP 5 
V 195   A 285   
H 196   L 286   
L 197   A 287   
M 198   Q 288   
P 199   Q 289   
L 200   F 290   
M 201   G 291   
L 202   I 292   
V 203   P 293   
A 204   M 294   
G 205   S 295   
D 206   S 296   
H 207   H 297   
A 208   L 298   
I 209   F 299   
N 210   Q 300   
D 211   E 301   
REMARK TAR GAP 5 
M 212   L 307   
A 213   A 308   
S 214   A 309   
D 215   T 310   
D 216   P 311   
G 217   T 312   
D 218   A 313   
S 219   H 314   
W 220   W 315   
K 221   L 316   
M 222   E 317   
R 223   R 318   
F 224   L 319   
N 225   D 320   
A 226   L 321   
A 227   A 322   
G 228   G 323   
I 229   S 324   
P 230   V 325   
A 231   I 326   
T 232   E 327   
P 233   P 328   
W 234   T 329   
L 235   L 330   
S 236   T 331   
G 237   F 332   
L 238   E 333   
G 239   G 334   
E 240   G 335   
N 241   N 336   
P 242   A 337   
A 243   V 338   
I 244   I 339   
TER 
END 
