PFRMAT AL  
TARGET T0055 
AUTHOR 9808-8259-1323 
METHOD Searched 1962 pdb sequences with max. 90% identity using target 
METHOD sequence PAM250.  
REMARK    
REMARK Results: 
REMARK           Name               ZScore Score Length   Documentation .. 
REMARK pdb90:1esl                +  12.90  12.45  157. !  Resolution=2.00  157 residues E-SELECTIN (LECTIN AND EGF DOMAINS, RESIDUES 1 -  
REMARK pdb90:1kjd                +   7.30   8.57  120. !  Resolution=0.00  120 residues MOL_ID: 1; 
REMARK pdb90:1hlj                +   7.07   8.41  113. !  Resolution=0.00  113 residues IGE RECEPTOR (MURINE, LOW-AFFINITY) (FCERII(SLASH 
REMARK pdb90:1kjb                +   7.00   8.36  120. !  Resolution=0.00  120 residues MOL_ID: 1; 
REMARK ALignment: 
REMARK  alignment method : FIT_PRF  (P) 
REMARK t0055.pep                  1 MDYEILFSDETMNYADAGTYCQSRGMALVSSAMRDSTM.VKAILAFTEV 
REMARK 1esl.seq                   1 ..WSYNTSTEAMTYDEASAYCQQRYTHLVAIQNKEEIEYLNSILSYS.. 
REMARK   Consensus                1 MDYEILFSDETMDYADAGTYCQSRGMALVSSAMRDSTM.VKAILAFTEV 
REMARK    
REMARK t0055.pep                 49 KGHDYWVGADNLQDGAYNFLWNDGV.SLPTDSDLWSPNEPSNPQSWQLCV 
REMARK 1esl.seq                  46 .PSYYWIGIRKVNN.V..WVWVGTQKPLTEEAKNWAPGEPNNRQKDEDCV 
REMARK   Consensus               51 KGHDYWVGADDLQDGAYDFLWDDGV.SLPTDSDLWSPDEPSDPQSWQLCV 
REMARK    
REMARK t0055.pep                 98 Q..I.WSKYN.LLDDVGCGGARRVICEKELDD 
REMARK 1esl.seq                  92 EIYIKREKDVGMWNDERCSKKKLALCYTAACT 
REMARK   Consensus              101 Q..I.WSKYD.LLDDVGCGGARRVICEKELDD 
REMARK    
MODEL 1  
PARENT 1esl 
Y   3    W   1     
E   4    S   2     
I   5    Y   3     
L   6    N   4     
F   7    T   5     
S   8    S   6     
D   9    T   7     
E  10    E   8     
T  11    A   9     
M  12    M  10     
N  13    T  11     
Y  14    Y  12     
A  15    D  13     
D  16    E  14     
A  17    A  15     
G  18    S  16     
T  19    A  17     
Y  20    Y  18     
C  21    C  19     
Q  22    Q  20     
S  23    Q  21     
R  24    R  22     
G  25    Y  23     
M  26    T  24     
A  27    H  25     
L  28    L  26     
V  29    V  27     
S  30    A  28     
S  31    I  29     
A  32    Q  30     
M  33    N  31     
R  34    K  32     
D  35    E  33     
S  36    E  34     
T  37    I  35     
M  38    E  36     
V  39    L  38     
K  40    N  39     
A  41    S  40     
I  42    I  41     
L  43    L  42     
A  44    S  43     
F  45    Y  44     
T  46    S  45     
G  50    P  46     
H  51    S  47     
D  52    Y  48     
Y  53    Y  49     
W  54    W  50     
V  55    I  51     
G  56    G  52     
A  57    I  53     
D  58    R  54     
N  59    K  55     
L  60    V  56     
Q  61    N  57     
D  62    N  58     
A  64    V  59     
F  67    W  60     
L  68    V  61     
W  69    W  62     
N  70    V  63     
D  71    G  64     
G  72    T  65     
V  73    Q  66     
S  74    P  68     
L  75    L  69     
P  76    T  70     
T  77    E  71     
D  78    E  72     
S  79    A  73     
D  80    K  74     
L  81    N  75     
W  82    W  76     
S  83    A  77     
P  84    P  78     
N  85    G  79     
E  86    E  80     
P  87    P  81     
S  88    N  82     
N  89    N  83     
P  90    R  84     
Q  91    Q  85     
S  92    K  86     
W  93    D  87     
Q  94    E  88     
L  95    D  89     
C  96    C  90     
V  97    V  91     
Q  98    E  92     
I  99    I  95     
W 100    R  97     
S 101    E  98     
K 102    K  99     
Y 103    D 100     
N 104    V 101     
L 105    M 103     
L 106    W 104     
D 107    N 105     
D 108    D 106     
V 109    E 107     
G 110    R 108     
C 111    C 109     
G 112    S 110     
G 113    K 111     
A 114    K 112     
R 115    K 113     
R 116    L 114     
V 117    A 115     
I 118    L 116     
C 119    C 117     
E 120    Y 118     
K 121    T 119     
E 122    A 120     
L 123    A 121     
D 124    C 122     
D 125    T 123     
TER 
END 
