PFRMAT AL 
TARGET T0058 
AUTHOR 9808-8259-1323 
METHOD Searched 1962 pdb sequences with max. 90% identity using target 
METHOD sequence and PAM250.  
REMARK 
REMARK Results: 
REMARK           Name               ZScore Score Length   Documentation .. 
REMARK pdb90:1akz                +  82.81  68.91  223. !  Resolution=1.57  223 residues MOL_ID: 1; 
REMARK pdb90:1udg                +  58.34  49.70  228. !  Resolution=1.75  228 residues MOL_ID: 1; 
REMARK pdb90:1nlg                +   4.51   7.43  340. !  Resolution=0.00  340 residues MOL_ID: 1; 
REMARK pdb90:1ggbH               +   4.35   7.31  215. ! Resolution=2.80  215 residues IGG2A FAB FRAGMENT (50.1) 
REMARK Alignment: 
REMARK    
REMARK t0058.pep                  1 MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRF 
REMARK 1AKZ                       3 .FFGESWKKHLSGEFGKPYFIKLMGFVAEERKH.YTVYPPPHQVFTWTQM 
REMARK   Consensus                1 MADELTWHDVLAEEKQQPYFLDTLQTVASERQSGVTIYPPQKDVFDAFRF 
REMARK    
REMARK t0058.pep                 51 TELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTI 
REMARK 1AKZ                      51 CDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLENIYKELSTDI 
REMARK   Consensus               51 TELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLDMYKELEDTI 
REMARK    
REMARK t0058.pep                101 PGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVIS 
REMARK 1AKZ                     101 EDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVS 
REMARK   Consensus              101 PGFTRPDHGYLESWARQGVLLLDTVLTVRAGQAHSHASLGWETFTDKVIS 
REMARK    
REMARK t0058.pep                151 LINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGC 
REMARK 1AKZ                     151 WLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGC 
REMARK   Consensus              151 LIDQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGC 
REMARK    
REMARK t0058.pep                201 NHFVLANQWLEQRGETPIDWMPVLPAESE 
REMARK Alignment: 
REMARK 1AKZ                     201 RHFSKTNELLQKSGKKPIDWK........ 
REMARK   Consensus              201 DHFVLADQWLEQRGETPIDWMPVLPAESE 
REMARK    
MODEL 1  
PARENT 1AKZ 
A   2    F  84 
N   3    F  85 
E   4    G  86 
L   5    E  87 
T   6    S  88 
W   7    W  89 
H   8    K  90 
D   9    K  91 
V  10    H  92 
L  11    L  93 
A  12    S  94 
E  13    G  95 
E  14    E  96 
K  15    F  97 
Q  16    G  98 
Q  17    K  99 
P  18    P 100 
Y  19    Y 101 
F  20    F 102 
L  21    I 103 
N  22    K 104 
T  23    L 105 
L  24    M 106 
Q  25    G 107 
T  26    F 108 
V  27    V 109 
A  28    A 110 
S  29    E 111 
E  30    E 112 
R  31    R 113 
Q  32    K 114 
S  33    H 115 
V  35    Y 116 
T  36    T 117 
I  37    V 118 
Y  38    Y 119 
P  39    P 120 
P  40    P 121 
Q  41    P 122 
K  42    H 123 
D  43    Q 124 
V  44    V 125 
F  45    F 126 
N  46    T 127 
A  47    W 128 
F  48    T 129 
R  49    Q 130 
F  50    M 131 
T  51    C 132 
E  52    D 133 
L  53    I 134 
G  54    K 135 
D  55    D 136 
V  56    V 137 
K  57    K 138 
V  58    V 139 
V  59    V 140 
I  60    I 141 
L  61    L 142 
G  62    G 143 
Q  63    Q 144 
D  64    D 145 
P  65    P 146 
Y  66    Y 147 
H  67    H 148 
G  68    G 149 
P  69    P 150 
G  70    N 151 
Q  71    Q 152 
A  72    A 153 
H  73    H 154 
G  74    G 155 
L  75    L 156 
A  76    C 157 
F  77    F 158 
S  78    S 159 
V  79    V 160 
R  80    Q 161 
P  81    R 162 
G  82    P 163 
I  83    V 164 
A  84    P 165 
I  85    P 166 
P  86    P 167 
P  87    P 168 
S  88    S 169 
L  89    L 170 
L  90    E 171 
N  91    N 172 
M  92    I 173 
Y  93    Y 174 
K  94    K 175 
E  95    E 176 
L  96    L 177 
E  97    S 178 
N  98    T 179 
T  99    D 180 
I 100    I 181 
P 101    E 182 
G 102    D 183 
F 103    F 184 
T 104    V 185 
R 105    H 186 
P 106    P 187 
N 107    G 188 
H 108    H 189 
G 109    G 190 
Y 110    D 191 
L 111    L 192 
E 112    S 193 
S 113    G 194 
W 114    W 195 
A 115    A 196 
R 116    K 197 
Q 117    Q 198 
G 118    G 199 
V 119    V 200 
L 120    L 201 
L 121    L 202 
L 122    L 203 
N 123    N 204 
T 124    A 205 
V 125    V 206 
L 126    L 207 
T 127    T 208 
V 128    V 209 
R 129    R 210 
A 130    A 211 
G 131    H 212 
Q 132    Q 213 
A 133    A 214 
H 134    N 215 
S 135    S 216 
H 136    H 217 
A 137    K 218 
S 138    E 219 
L 139    R 220 
G 140    G 221 
W 141    W 222 
E 142    E 223 
T 143    Q 224 
F 144    F 225 
T 145    T 226 
D 146    D 227 
K 147    A 228 
V 148    V 229 
I 149    V 230 
S 150    S 231 
L 151    W 232 
I 152    L 233 
N 153    N 234 
Q 154    Q 235 
H 155    N 236 
R 156    S 237 
E 157    N 238 
G 158    G 239 
V 159    L 240 
V 160    V 241 
F 161    F 242 
L 162    L 243 
L 163    L 244 
W 164    W 245 
G 165    G 246 
S 166    S 247 
H 167    Y 248 
A 168    A 249 
Q 169    Q 250 
K 170    K 251 
K 171    K 252 
G 172    G 253 
A 173    S 254 
I 174    A 255 
I 175    I 256 
D 176    D 257 
K 177    R 258 
Q 178    K 259 
R 179    R 260 
H 180    H 261 
H 181    H 262 
V 182    V 263 
L 183    L 264 
K 184    Q 265 
A 185    T 266 
P 186    A 267 
H 187    H 268 
P 188    P 269 
S 189    S 270 
P 190    P 271 
L 191    L 272 
S 192    S 273 
A 193    V 274 
H 194    Y 275 
R 195    R 276 
G 196    G 277 
F 197    F 278 
F 198    F 279 
G 199    G 280 
C 200    C 281 
N 201    R 282 
H 202    H 283 
F 203    F 284 
V 204    S 285 
L 205    K 286 
A 206    T 287 
N 207    N 288 
Q 208    E 289 
W 209    L 290 
L 210    L 291 
E 211    Q 292 
Q 212    K 293 
R 213    S 294 
G 214    G 295 
E 215    K 296 
T 216    K 297 
P 217    P 298 
I 218    I 299 
D 219    D 300 
W 220    W 301 
M 221    K 302 
TER 
END 
