PFRMAT AL 
TARGET T0061 
AUTHOR 2746-8822-4809 
METHOD SEQFOLD(MSI) IMPLEMENTATION OF FOLD RECOGNITION 
METHOD BASED ON FISCHER AND EISENBERG PROT. SCI. 5, 943, 1996 
METHOD GLOBAL-LOCAL SEQUENCE ALIGNEMENT DRIVEN BY PREDICTED 
METHOD SECONDARY STRUCTURE  
METHOD CONSEQUENTLY - MODELS ARE ALWAYS BASED ON SINGLE SEQUENCE 
METHOD NOVEL SIGNIFICANCE ANALYSIS BASED ON RANDOM ALIGNMENTS  
MODEL 2 
PARENT 1ksr 
K 10    A 1     
K 11    D 2     
P 12    P 3     
V 13    E 4     
N 14    K 5     
S 15    S 6     
W 16    Y 7     
T 17    A 8     
C 18    E 9     
E 19    G 10    
D 20    P 11    
F 21    G 12    
L 22    L 13    
A 23    D 14    
V 24    G 15    
D 25    G 16    
E 26    E 17    
S 27    C 18    
F 28    F 19    
Q 29    Q 20    
P 30    P 21    
T 31    S 22    
A 32    K 23    
V 33    F 24    
G 34    K 25    
F 35    I 26    
REMARK TAR GAP 4 
A 36    P 31    
E 37    D 32    
A 38    G 33    
L 39    V 34    
N 40    H 35    
N 41    R 36    
K 42    T 37    
D 43    D 38    
K 44    G 39    
P 45    G 40    
E 46    D 41    
D 47    G 42    
A 48    F 43    
V 49    V 44    
L 50    V 45    
D 51    T 46    
V 52    I 47    
Q 53    E 48    
G 54    G 49    
I 55    P 50    
A 56    A 51    
T 57    P 52    
V 58    V 53    
T 59    D 54    
P 60    P 55    
A 61    V 56    
I 62    M 57    
V 63    V 58    
Q 64    D 59    
A 65    N 60    
C 66    G 61    
T 67    D 62    
Q 68    G 63    
D 69    T 64    
K 70    Y 65    
Q 71    D 66    
A 72    V 67    
N 73    E 68    
F 74    F 69    
K 75    E 70    
D 76    P 71    
K 77    K 72    
V 78    E 73    
K 79    A 74    
G 80    G 75    
E 81    D 76    
W 82    Y 77    
TER 
END 
