PFRMAT AL 
TARGET T0061 
AUTHOR 3707-4066-9021 
REMARK FORESST ordered by Z scores, length ratios and J scores using 
REMARK SIMPA with homologues as secondary structure predictions. 
METHOD FORESST is a fold recognition method based on secondary structure 
METHOD predictions and hidden Markov models of observed secondary structures. 
METHOD Di Francesco V, Garnier J and Munson PJ., 1997, Protein Topology  
METHOD recognition METHOD from secondary structure sequences: application  
METHOD of the hidden Markov model to the alpha class proteins.  
METHOD J. Mol. Biol.267:446-463. 
MODEL  1 
PARENT 1tyaE  
A  1    V  223 
D  2    T  224 
A  3    K  225 
Q  4    A  226 
K  5    D  227 
A  6    G  228 
A  7    T  229 
D  8    K  230 
N  9    F  231 
K 10    G  232 
K 11    K  233 
P 12    T  234 
V 13    E  235 
N 14    S  236 
T 17    G  237 
C 18    T  238 
E 19    I  239 
D 20    W  240 
D 25    L  241 
E 26    D  242 
S 27    K  243 
F 28    E  244 
Q 29    K  245 
P 30    T  246 
T 31    S  247 
A 32    P  248 
V 33    Y  249 
G 34    E  250 
F 35    F  251 
A 36    Y  252 
E 37    Q  253 
A 38    F  254 
L 39    W  255 
N 40    I  256 
N 41    N  257 
K 42    T  258 
D 43    D  259 
K 44    D  260 
P 45    R  261 
E 46    D  262 
I 55    T  271 
A 56    F  272 
T 57    L  273 
V 58    S  274 
T 59    K  275 
P 60    E  276 
A 61    E  277 
I 62    I  278 
V 63    E  279 
Q 64    A  280 
A 65    L  281 
C 66    E  282 
T 67    Q  283 
Q 68    P  289 
D 69    E  290 
K 70    K  291 
Q 71    R  292 
A 72    A  293 
N 73    A  294 
F 74    Q  295 
K 75    K  296 
D 76    T  297 
K 77    L  298 
V 78    A  299 
K 79    E  300 
G 80    E  301 
E 81    V  302 
W 82    T  303 
D 83    K  304 
K 84    L  305 
I 85    V  306 
K 86    A  315 
K 87    I  316 
D 88    R  317 
M 89    I  318 
TER 
END 
