 
PFRMAT AL 
TARGET T0064 
AUTHOR 8120-3487-1357 
REMARK Matrix Used: 2cro BS_30_25% 
REMARK Matrix Used: 1al8 BS_90_10%  
REMARK Alignment Method Used: Quasi-Global Dynamic Programming 
METHOD Sequence-Structure alignment based on the environments 
METHOD published in: Deerfield, Holland-Minkley, Geigel, and  
METHOD Nicholas 1997. "Classification of the Environment of  
METHOD Protein Residues" J. Prot. Chem. 16:441-446. 
METHOD  
METHOD This test uses our latest (unpublished) environment  
METHOD classifications and extentions. 
MODEL  1 
PARENT 1al8 
E   A64 I    3 
K   A65 T    4 
H   A66 N    5 
E   A67 V    6 
T   A68 N    7 
E   A69 E    8 
Y   A70 Y    9 
D   A71 E   10 
G   A72 A   11 
Q   A73 I   12 
L   A74 A   13 
D   A75 K   14 
S   A76 Q   15 
E   A77 K   16 
W   A78 L   17 
E   A79 P   18 
K   A80 K   19 
L   A81 M   20 
V   A82 V   21 
R   A83 Y   22 
D   A84 D   23 
A   A85 Y   24 
M   A86 Y   25 
T   A87 A   26 
S   A88 S   27 
G   A89 G   28 
V   A90 A   29 
S   A91 E   30 
K   A92 D   31 
K   A93 Q   32 
Q   A94 W   33 
F   A95 T   34 
R   A96 L   35 
E   A97 A   36 
F   A98 E   37 
L   A99 N   38 
D  A100 R   39 
Y  A101 N   40 
Q  A102 A   41 
K  A103 F   42 
W  A104 S   43 
R  A105 R   44 
K  A106 I   45 
S  A107 L   46 
Q  A108 F   47 
K  A109 R   48 
E  A110 P   49 
E  A111 R   50 
TER 
END 
