PFRMAT AL 
TARGET T0071 
AUTHOR 2746-8822-4809 
METHOD SEQFOLD(MSI) IMPLEMENTATION OF FOLD RECOGNITION 
METHOD BASED ON FISCHER AND EISENBERG PROT. SCI. 5, 943, 1996 
METHOD GLOBAL-LOCAL SEQUENCE ALIGNEMENT DRIVEN BY PREDICTED 
METHOD SECONDARY STRUCTURE  
METHOD CONSEQUENTLY - MODELS ARE ALWAYS BASED ON SINGLE SEQUENCE 
METHOD NOVEL SIGNIFICANCE ANALYSIS BASED ON RANDOM ALIGNMENTS  
MODEL 2 
PARENT 1mhc_A 
G 79    G 1     
G 80    S 2     
A 81    H 3     
Q 82    S 4     
V 83    L 5     
Q 84    R 6     
Q 85    Y 7     
V 86    F 8     
I 87    H 9     
N 88    T 10    
I 89    A 11    
E 90    V 12    
C 91    S 13    
I 92    R 14    
S 93    P 15    
D 94    G 16    
F 95    R 17    
T 96    G 18    
E 97    E 19    
A 98    P 20    
P 99    Q 21    
V 100   Y 22    
L 101   I 23    
N 102   S 24    
I 103   V 25    
Q 104   G 26    
F 105   Y 27    
R 106   V 28    
Y 107   D 29    
G 108   D 30    
G 109   V 31    
T 110   Q 32    
F 111   F 33    
Q 112   Q 34    
N 113   R 35    
V 114   C 36    
S 115   D 37    
V 116   S 38    
K 117   I 39    
L 118   E 40    
P 119   E 41    
I 120   I 42    
T 121   P 43    
L 122   R 44    
N 123   M 45    
K 124   E 46    
F 125   P 47    
F 126   R 48    
Q 127   A 49    
P 128   P 50    
REMARK TAR GAP 1 
T 129   M 52    
E 130   E 53    
M 131   K 54    
A 132   E 55    
S 133   R 56    
Q 134   P 57    
D 135   E 58    
F 136   Y 59    
F 137   W 60    
Q 138   K 61    
R 139   E 62    
W 140   L 63    
K 141   K 64    
REMARK TAR GAP 1 
Q 142   K 66    
L 143   V 67    
S 144   K 68    
N 145   N 69    
P 146   I 70    
Q 147   A 71    
Q 148   Q 72    
E 149   S 73    
V 150   A 74    
Q 151   R 75    
N 152   A 76    
I 153   N 77    
F 154   L 78    
K 155   R 79    
A 156   T 80    
K 157   L 81    
H 158   L 82    
P 159   R 83    
M 160   Y 84    
D 161   Y 85    
T 162   N 86    
E 163   Q 87    
I 164   S 88    
T 165   E 89    
K 166   G 90    
A 167   G 91    
K 168   S 92    
I 169   H 93    
I 170   I 94    
REMARK REF GAP 1 
F 172   L 95    
G 173   Q 96    
S 174   W 97    
A 175   M 98    
L 176   V 99    
L 177   S 100   
E 178   C 101   
E 179   E 102   
V 180   V 103   
D 181   G 104   
P 182   P 105   
N 183   D 106   
REMARK REF GAP 1 
A 185   M 107   
N 186   R 108   
F 187   L 109   
V 188   L 110   
G 189   G 111   
A 190   A 112   
G 191   H 113   
I 192   Y 114   
I 193   Q 115   
H 194   A 116   
T 195   A 117   
K 196   Y 118   
T 197   D 119   
T 198   G 120   
Q 199   S 121   
I 200   D 122   
G 201   Y 123   
C 202   I 124   
L 203   T 125   
L 204   L 126   
R 205   N 127   
L 206   E 128   
E 207   D 129   
REMARK TAR GAP 6 
P 208   V 136   
N 209   D 137   
L 210   M 138   
Q 211   V 139   
A 212   S 140   
Q 213   Q 141   
M 214   I 142   
Y 215   T 143   
R 216   K 144   
L 217   S 145   
T 218   R 146   
L 219   L 147   
R 220   E 148   
T 221   S 149   
S 222   A 150   
K 223   G 151   
D 224   T 152   
T 225   A 153   
V 226   E 154   
S 227   Y 155   
Q 228   F 156   
R 229   R 157   
L 230   A 158   
REMARK TAR GAP 5 
C 231   C 164   
E 232   L 165   
L 233   E 166   
L 234   L 167   
S 235   L 168   
E 236   H 169   
Q 237   R 170   
F 238   F 171   
TER 
END 
