PFRMAT AL 
TARGET T0071 
AUTHOR 2746-8822-4809 
METHOD SEQFOLD(MSI) IMPLEMENTATION OF FOLD RECOGNITION 
METHOD BASED ON FISCHER AND EISENBERG PROT. SCI. 5, 943, 1996 
METHOD GLOBAL-LOCAL SEQUENCE ALIGNEMENT DRIVEN BY PREDICTED 
METHOD SECONDARY STRUCTURE  
METHOD CONSEQUENTLY - MODELS ARE ALWAYS BASED ON SINGLE SEQUENCE 
METHOD NOVEL SIGNIFICANCE ANALYSIS BASED ON RANDOM ALIGNMENTS  
MODEL 4 
PARENT 1scu_B 
S 1     A 8     
E 2     K 9     
D 3     Q 10    
N 4     L 11    
F 5     F 12    
A 6     A 13    
R 7     R 14    
F 8     Y 15    
REMARK REF GAP 1 
C 10    G 16    
K 11    L 17    
N 12    P 18    
N 13    A 19    
G 14    P 20    
V 15    V 21    
L 16    G 22    
F 17    Y 23    
E 18    A 24    
N 19    C 25    
Q 20    T 26    
L 21    T 27    
L 22    P 28    
Q 23    R 29    
I 24    E 30    
G 25    A 31    
L 26    E 32    
K 27    E 33    
S 28    A 34    
E 29    A 35    
F 30    S 36    
R 31    K 37    
Q 32    I 38    
N 33    G 39    
L 34    A 40    
G 35    G 41    
R 36    P 42    
M 37    W 43    
F 38    V 44    
I 39    V 45    
F 40    K 46    
Y 41    C 47    
G 42    Q 48    
N 43    V 49    
K 44    H 50    
T 45    A 51    
S 46    G 52    
T 47    G 53    
Q 48    R 54    
F 49    G 55    
L 50    K 56    
N 51    A 57    
F 52    G 58    
T 53    G 59    
P 54    V 60    
T 55    K 61    
L 56    V 62    
I 57    V 63    
C 58    N 64    
A 59    S 65    
REMARK TAR GAP 1 
D 60    E 67    
D 61    D 68    
L 62    I 69    
Q 63    R 70    
T 64    A 71    
N 65    F 72    
L 66    A 73    
N 67    E 74    
REMARK TAR GAP 2 
L 68    L 77    
Q 69    G 78    
T 70    K 79    
K 71    R 80    
P 72    L 81    
V 73    V 82    
D 74    T 83    
P 75    Y 84    
T 76    Q 85    
V 77    T 86    
D 78    D 87    
G 79    A 88    
G 80    N 89    
A 81    G 90    
Q 82    Q 91    
V 83    P 92    
Q 84    V 93    
Q 85    N 94    
V 86    Q 95    
I 87    I 96    
N 88    L 97    
I 89    V 98    
E 90    E 99    
C 91    A 100   
I 92    A 101   
S 93    T 102   
D 94    D 103   
F 95    I 104   
T 96    A 105   
E 97    K 106   
A 98    E 107   
P 99    L 108   
V 100   Y 109   
L 101   L 110   
N 102   G 111   
I 103   A 112   
Q 104   V 113   
F 105   V 114   
R 106   D 115   
Y 107   R 116   
G 108   S 117   
G 109   S 118   
REMARK REF GAP 2 
Q 112   R 119   
N 113   R 120   
V 114   V 121   
S 115   V 122   
V 116   F 123   
K 117   M 124   
L 118   A 125   
P 119   S 126   
I 120   T 127   
T 121   E 128   
L 122   G 129   
N 123   G 130   
K 124   V 131   
F 125   E 132   
F 126   I 133   
Q 127   E 134   
P 128   K 135   
T 129   V 136   
E 130   A 137   
M 131   E 138   
A 132   E 139   
S 133   T 140   
Q 134   P 141   
D 135   H 142   
F 136   L 143   
F 137   I 144   
Q 138   H 145   
R 139   K 146   
REMARK TAR GAP 2 
W 140   L 149   
K 141   D 150   
Q 142   P 151   
L 143   L 152   
S 144   T 153   
N 145   G 154   
P 146   P 155   
Q 147   M 156   
Q 148   P 157   
E 149   Y 158   
V 150   Q 159   
Q 151   G 160   
N 152   R 161   
I 153   E 162   
F 154   L 163   
K 155   A 164   
A 156   F 165   
K 157   K 166   
H 158   L 167   
P 159   G 168   
M 160   L 169   
D 161   E 170   
T 162   G 171   
E 163   K 172   
I 164   L 173   
T 165   V 174   
K 166   Q 175   
A 167   Q 176   
K 168   F 177   
I 169   T 178   
I 170   K 179   
G 171   I 180   
F 172   F 181   
G 173   M 182   
S 174   G 183   
A 175   L 184   
L 176   A 185   
L 177   T 186   
E 178   I 187   
E 179   F 188   
V 180   L 189   
D 181   E 190   
P 182   R 191   
N 183   D 192   
P 184   L 193   
A 185   A 194   
N 186   L 195   
F 187   I 196   
V 188   E 197   
G 189   I 198   
A 190   N 199   
G 191   P 200   
I 192   L 201   
I 193   V 202   
H 194   I 203   
T 195   T 204   
K 196   K 205   
T 197   Q 206   
T 198   G 207   
Q 199   D 208   
I 200   L 209   
G 201   I 210   
C 202   C 211   
L 203   L 212   
L 204   D 213   
REMARK TAR GAP 1 
R 205   K 215   
L 206   L 216   
E 207   G 217   
P 208   A 218   
N 209   D 219   
L 210   G 220   
Q 211   N 221   
A 212   A 222   
Q 213   L 223   
M 214   F 224   
Y 215   R 225   
R 216   Q 226   
L 217   P 227   
T 218   D 228   
L 219   L 229   
R 220   R 230   
T 221   E 231   
S 222   M 232   
K 223   R 233   
D 224   D 234   
T 225   Q 235   
V 226   S 236   
S 227   Q 237   
Q 228   E 238   
R 229   D 239   
L 230   P 240   
C 231   R 241   
E 232   E 242   
L 233   A 243   
L 234   Q 244   
TER 
END 
