PFRMAT AL 
TARGET T0077 
AUTHOR 3707-4066-9021 
REMARK FORESST ordered by Z scores, length ratios and J scores using 
REMARK SIMPA with homologues as secondary structure predictions. 
METHOD FORESST is a fold recognition method based on secondary structure 
METHOD predictions and hidden Markov models of observed secondary structures. 
METHOD Di Francesco V, Garnier J and Munson PJ., 1997, Protein Topology  
METHOD recognition METHOD from secondary structure sequences: application  
METHOD of the hidden Markov model to the alpha class proteins.  
METHOD J. Mol. Biol.267:446-463. 
MODEL  1 
PARENT 1etc 
M   1    I  335 
A   2    Q  336 
P   3    L  337 
V   4    W  338 
K   5    Q  339 
S   6    F  340 
Q   7    L  341 
E   8    L  342 
S   9    E  343 
I  10    L  344 
N  11    L  345 
Q  12    T  346 
K  13    D  347 
L  14    I  354 
A  15    S  355 
L  16    W  356 
V  17    T  357 
I  18    G  358 
K  19    D  359 
S  20    G  360 
G  21    W  361 
K  22    E  362 
Y  23    F  363 
T  24    K  364 
L  25    L  365 
G  26    S  366   
Y  27    D  367 
K  28    P  368 
S  29    D  369 
T  30    E  370 
V  31    V  371 
K  32    A  372 
S  33    R  373 
L  34    R  374 
R  35    W  375 
Q  36    G  376 
G  37    K  377 
K  38    R  378 
S  39    K  379 
A  45    N  380 
A  46    K  381 
N  47    P  382 
T  48    K  383 
P  49    M  384 
V  50    N  385 
L  51    Y  386 
R  52    E  387 
K  53    K  388 
S  54    L  389 
E  55    S  390 
L  56    R  391 
E  57    G  392 
Y  58    L  393 
Y  59    R  394 
A  60    Y  395 
M  61    Y  396 
L  62    Y  397 
S  63    D  398 
K  64    K  399 
T  65    N  400 
K  66    I  401 
V  67    I  402 
Y  68    H  403 
Y  69    K  404 
F  70    T  405 
Q  71    A  406 
G  72    G  407 
G  73    K  408 
N  74    R  409 
N  75    Y  410 
E  76    V  411 
L  77    Y  412 
G  78    R  413 
T  79    F  414 
A  80    V  415 
V  81    C  416 
G  82    D  417 
K  83    L  418 
L  84    Q  419 
F  85    S  420 
R  86    L  421 
V  87    L  422 
L  93    G  423 
E  94    Y  424 
A  95    T  425 
G  96    P  426 
D  97    E  427 
S  98    E  428 
D  99    A  431 
I 100    M  432 
L 101    L  433 
T 102    D  434 
T 103    V  435 
L 104    K  436 
A 105    A  439 
TER 
END 
