PFRMAT AL 
TARGET T0081 
AUTHOR 2746-8822-4809 
METHOD SEQFOLD(MSI) IMPLEMENTATION OF FOLD RECOGNITION 
METHOD BASED ON FISCHER AND EISENBERG PROT. SCI. 5, 943, 1996 
METHOD GLOBAL-LOCAL SEQUENCE ALIGNEMENT DRIVEN BY PREDICTED 
METHOD SECONDARY STRUCTURE  
METHOD CONSEQUENTLY - MODELS ARE ALWAYS BASED ON SINGLE SEQUENCE 
METHOD NOVEL SIGNIFICANCE ANALYSIS BASED ON RANDOM ALIGNMENTS  
MODEL 2 
PARENT 1ak4_C 
A 10    Q 404   
R 11    N 405   
K 12    L 406   
H 13    Q 407   
I 14    G 408   
A 15    Q 409   
L 16    M 410   
V 17    V 411   
A 18    H 412   
H 19    Q 413   
D 20    A 414   
H 21    I 415   
C 22    S 416   
K 23    P 417   
Q 24    R 418   
M 25    T 419   
L 26    L 420   
M 27    N 421   
S 28    A 422   
W 29    W 423   
V 30    V 424   
E 31    K 425   
REMARK REF GAP 4 
L 36    V 426   
L 37    V 427   
E 38    E 428   
Q 39    E 429   
H 40    K 430   
V 41    A 431   
L 42    F 432   
Y 43    S 433   
A 44    P 434   
T 45    E 435   
G 46    V 436   
T 47    I 437   
T 48    P 438   
REMARK TAR GAP 2 
G 49    S 441   
N 50    A 442   
L 51    L 443   
I 52    S 444   
S 53    E 445   
R 54    G 446   
A 55    A 447   
T 56    T 448   
G 57    P 449   
M 58    Q 450   
N 59    D 451   
V 60    L 452   
N 61    N 453   
A 62    T 454   
M 63    M 455   
L 64    L 456   
S 65    N 457   
REMARK REF GAP 1 
P 67    T 458   
M 68    V 459   
G 69    G 460   
G 70    G 461   
D 71    H 462   
Q 72    Q 463   
Q 73    A 464   
V 74    A 465   
G 75    M 466   
A 76    Q 467   
L 77    M 468   
I 78    L 469   
S 79    K 470   
E 80    E 471   
REMARK REF GAP 1 
K 82    T 472   
I 83    I 473   
D 84    N 474   
V 85    E 475   
L 86    E 476   
I 87    A 477   
F 88    A 478   
F 89    E 479   
W 90    W 480   
D 91    D 481   
P 92    R 482   
L 93    L 483   
N 94    H 484   
A 95    P 485   
V 96    V 486   
REMARK TAR GAP 12 
P 97    P 499   
H 98    R 500   
D 99    G 501   
P 100   S 502   
D 101   D 503   
V 102   I 504   
REMARK TAR GAP 3 
K 103   T 508   
A 104   S 509   
L 105   T 510   
L 106   L 511   
R 107   Q 512   
L 108   E 513   
A 109   Q 514   
T 110   I 515   
V 111   G 516   
W 112   W 517   
REMARK TAR GAP 3 
N 113   N 521   
I 114   P 522   
P 115   P 523   
V 116   I 524   
A 117   P 525   
T 118   V 526   
N 119   G 527   
V 120   E 528   
A 121   I 529   
T 122   Y 530   
A 123   K 531   
D 124   R 532   
F 125   W 533   
I 126   I 534   
I 127   I 535   
Q 128   L 536   
S 129   G 537   
REMARK REF GAP 2 
F 132   L 538   
N 133   N 539   
D 134   K 540   
A 135   I 541   
V 136   V 542   
D 137   R 543   
I 138   M 544   
L 139   Y 545   
TER 
END 
