
PFRMAT AL
TARGET T0086
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.72
REMARK CONFIDENCE: GUESS (ZSCORE>3.5)
REMARK DERIVED FROM HOMSTRAD PROFILE: PotD
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  3
PARENT 1a99_A
S     1    S    A85
H     2    A    A86
P     3    S    A87
A     4    F    A88
L     5    L    A89
T     6    E    A90
Q     7    R    A91
L     8    Q    A92
R     9    L    A93
A    10    T    A94
L    11    K   A103
R    12    S   A104
Y    13    K   A105
C    14    L   A106
K    15    P   A107
E    16    E   A108
I    17    W   A109
P    18    K   A110
A    19    N   A111
L    20    L   A112
D    21    D   A113
P    22    P   A114
Q    23    E   A115
L    24    L   A116
L    25    L   A117
D    26    K   A118
W    27    L   A119
L    28    V   A120
L    29    A   A121
L    30    K   A122
E    31    H   A123
D    32    D   A124
S    33    A   A130
M    34    M   A131
T    35    P   A132
K    36    Y   A133
R    37    M   A134
F    38    W   A135
E    39    A   A136
Q    40    T   A137
Q    41    T   A138
G    42    G   A139
K    43    I   A140
T    44    G   A141
V    45    Y   A142
S    46    N   A143
V    47    V   A144
T    48    D   A145
M    49    K   A146
I    50    V   A147
R    51    K   A148
E    52    A   A149
G    53    V   A150
F    54    L   A151
V    55    G   A152
E    56    E   A153
Q    57    N   A154
N    58    A   A155
E    59    P   A156
I    60    V   A157
P    61    P   A166
E    62    E   A167
E    63    N   A168
L    64    L   A169
P    65    E   A170
L    66    K   A171
L    67    L   A172
P    68    K   A173
K    69    S   A174
E    70    C   A175
S    71    G   A176
R    72    V   A177
Y    73    S   A178
W    74    F   A179
L    75    L   A180
R    76    E   A184
E    77    E   A185
I    78    V   A186
L    79    F   A187
L    80    A   A188
C    81    T   A189
A    82    V   A190
D    83    L   A191
G    84    N   A192
E    85    Y   A193
P    86    L   A194
W    87    G   A195
L    88    K   A196
A    89    D   A197
G    90    P   A198
R    91    N   A199
T    92    S   A200
V    93    T   A201
P    95    K   A202
V    96    A   A203
S    97    D   A204
T    98    D   A205
L    99    Y   A206
S   100    T   A207
G   101    G   A208
L   104    P   A209
A   105    A   A210
L   106    T   A211
Q   107    D   A212
K   108    L   A213
L   109    L   A214
G   110    L   A215
K   111    K   A216
T   112    L   A217
P   113    R   A218
L   114    P   A219
G   115    N   A220
R   116    I   A221
Y   117    R   A222
L   118    Y   A223
F   119    F   A224
T   120    H   A225
S   121    S   A226
S   122    S   A227
T   123    Q   A228
L   124    Y   A229
T   125    I   A230
R   126    N   A231
D   127    D   A232
F   128    L   A233
I   129    A   A234
E   130    N   A235
I   131    I   A242
G   132    G   A243
R   133    W   A244
D   134    A   A245
A   135    G   A246
G   136    D   A247
L   137    V   A248
W   138    W   A249
G   139    Q   A250
R   140    A   A251
R   141    S   A252
S   142    N   A253
R   143    R   A254
L   144    A   A255
R   145    K   A256
L   146    E   A257
S   147    A   A258
G   148    K   A259
K   149    N   A260
P   150    G   A261
L   151    V   A262
L   152    N   A263
L   153    V   A264
T   154    S   A265
E   155    F   A266
L   156    S   A267
F   157    I   A268
L   158    P   A269
P   159    K   A270
A   160    E   A271
S   161    G   A272
P   162    A   A273
L   163    M   A274
Y   164    A   A275
TER
END

