
PFRMAT AL
TARGET T0086
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=4.46
REMARK CONFIDENCE: GUESS (ZSCORE>=3.5)
REMARK DERIVED FROM HOMSTRAD PROFILE: hs1dqra
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 1dqr_A
S     1    N    A37
H     2    H    A38
P     3    F    A39
A     4    S    A40
L     5    L    A41
T     6    T    A42
Q     7    L    A43
L     8    H    A49
R     9    I    A50
A    10    L    A51
L    11    L    A52
R    12    D    A53
Y    13    Y    A54
C    14    S    A55
K    15    K    A56
E    16    N    A57
I    17    L    A58
L    20    V    A59
D    21    T    A60
P    22    E    A61
Q    23    E    A62
L    24    V    A63
L    25    M    A64
D    26    H    A65
W    27    M    A66
L    28    L    A67
L    29    L    A68
L    30    D    A69
E    31    R    A80
D    32    E    A81
S    33    S    A82
M    34    M    A83
T    35    E    A87
K    36    K    A88
R    37    I    A89
F    38    N    A90
E    39    S    A91
Q    40    T    A92
Q    41    E    A93
G    42    D    A94
K    43    R    A95
T    44    A    A96
V    45    V    A97
S    46    L    A98
V    47    H    A99
T    48    V   A100
M    49    A   A101
I    50    L   A102
R    51    R   A103
E    52    D   A116
G    53    V   A117
F    54    M   A118
V    55    P   A119
E    56    E   A120
Q    57    V   A121
N    58    N   A122
E    59    K   A123
I    60    V   A124
P    61    L   A125
E    62    D   A126
E    63    K   A127
L    64    M   A128
P    65    K   A129
L    66    A   A130
L    67    F   A131
P    68    C   A132
K    69    Q   A133
E    70    R   A134
S    71    V   A135
R    72    R   A136
Y    73    S   A137
W    74    W   A140
L    75    I   A148
R    76    T   A149
E    77    D   A150
I    78    V   A151
L    79    I   A152
L    80    N   A153
C    81    I   A154
A    82    G   A155
D    83    I   A156
G    84    G   A157
E    85    G   A158
P    86    P   A163
W    87    L   A164
L    88    M   A165
A    89    V   A166
G    90    T   A167
R    91    E   A168
T    92    R   A179
V    93    V   A180
V    94    W   A181
P    95    F   A182
V    96    V   A183
S    97    S   A184
T    98    N   A185
L    99    I   A186
S   100    D   A187
G   101    G   A188
P   102    T   A189
E   103    H   A190
L   104    I   A191
A   105    A   A192
L   106    K   A193
Q   107    T   A194
K   108    L   A195
L   109    A   A196
G   110    C   A197
K   111    L   A198
T   112    N   A199
P   113    P   A200
L   114    E   A201
G   115    S   A202
R   116    S   A203
Y   117    L   A204
L   118    F   A205
F   119    I   A206
T   120    I   A207
S   121    A   A208
S   122    S   A209
T   123    K   A210
L   124    T   A213
T   125    T   A214
R   126    Q   A215
D   127    E   A216
F   128    T   A217
I   129    I   A218
E   130    T   A219
I   131    N   A220
G   132    A   A221
R   133    K   A222
D   134    T   A223
A   135    A   A224
G   136    K   A225
L   137    D   A226
W   138    W   A227
G   139    F   A228
R   140    L   A229
R   141    L   A230
S   142    S   A231
S   147    A   A232
G   148    K   A233
K   149    D   A234
P   150    P   A235
L   151    S   A236
L   152    T   A237
L   153    V   A238
T   154    A   A239
E   155    K   A240
L   156    H   A241
F   157    F   A242
L   158    V   A243
P   159    A   A244
A   160    L   A245
S   161    S   A246
P   162    T   A247
L   163    N   A248
Y   164    T   A249
TER
END

