
PFRMAT AL
TARGET T0087
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 2erc_A
P   12 Q 10
D   13 N 11
S   14 F 12
I   17 I 13
G   18 T 14
S   19 S 15
S   20 K 16
M   21 H 17
A   22 N 18
Y   23 I 19
A   24 D 20
Y   25 K 21
L   26 I 22
K   27 M 23
R   28 T 24
Q   29 N 25
L   30 L 28
G   31 N 29
V   32 E 30
D   33 H 31
A   34 D 32
Q   35 N 33
A   36 I 34
V   37 F 35
A   38 E 36
L   39 I 37
G   40 G 38
N   41 S 39
P   42 G 40
N   43 K 41
E   44 G 42
A   47 H 43
F   48 F 44
V   49 T 45
L   50 L 46
D   51 E 47
Y   52 L 48
F   53 C 52
G   54 N 53
I   55 F 54
Q   56 V 55
A   57 T 56
P   58 A 57
P   59 I 58
V   60 E 59
V   61 I 60
Q   65 D 61
A   66 H 62
E   67 K 63
G   68 L 64
A   69 C 65
K   70 K 66
Q   71 E 69
V   72 N 70
I   73 K 71
L   74 L 72
T   75 V 73
D   76 D 74
H   77 H 75
N   78 D 76
E   79 N 77
F   80 F 78
Q   81 Q 79
Q   82 V 80
S   83 L 81
I   84 N 82
A   85 K 83
D   86 D 84
I   87 I 85
R   88 L 86
E   89 Q 87
V   90 F 88
E   91 K 89
V  101 F 90
A  102 P 91
N  103 K 92
F  104 N 93
E  105 Q 94
T  106 S 95
A  107 Y 96
L  110 K 97
Y  111 I 98
M  112 F 99
R  113 G 100
L  114 N 101
E  115 I 102
P  116 P 103
V  117 Y 104
G  118 N 105
S  119 I 106
A  120 S 107
S  121 T 108
S  122 D 109
I  123 I 110
V  124 I 111
Y  125 R 112
R  126 K 113
L  127 I 114
Y  128 V 115
K  129 F 116
E  130 D 117
N  131 S 118
G  132 I 119
V  133 A 120
A  134 D 121
I  135 T 138
P  136 K 139
K  137 R 140
E  138 S 141
I  139 L 142
A  140 A 143
G  141 L 144
V  142 F 145
M  143 L 146
L  144 M 147
S  145 A 148
G  146 S 153
L  147 I 154
I  148 L 155
S  149 S 156
D  150 P 159
T  151 R 160
L  152 E 161
L  153 Y 162
L  154 F 163
K  155 K 180
S  156 S 181
P  157 R 182
T  158 I 183
T  159 S 184
H  160 H 185
A  161 K 186
S  162 D 187
D  163 K 188
P  164 Q 189
A  165 K 190
V  166 Y 191
A  167 N 192
E  168 Y 193
D  169 F 194
L  170 V 195
A  171 M 196
K  172 K 197
I  173 W 198
A  174 V 199
G  175 N 200
V  176 K 201
D  177 E 202
L  178 Y 203
Q  179 K 204
E  180 Q 211
Y  181 F 212
G  182 N 213
L  183 N 214
A  184 S 215
M  185 L 216
L  186 K 217
K  187 H 218
A  188 A 219
G  189 G 220
T  190 I 221
N  191 D 222
L  192 L 224
A  193 N 225
S  194 N 226
K  195 I 227
T  196 S 228
A  197 F 229
A  198 E 230
Q  199 Q 231
L  200 F 232
V  201 L 233
D  202 S 234
I  203 L 235
A  205 F 236
K  206 N 237
T  207 S 238
F  208 Y 239
E  209 K 240
L  210 L 241
N  211 F 242
G  212 N 243
S  213 K 244
TER
END

