
PFRMAT AL
TARGET T0087
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  2
PARENT 1A8P
REMARK DATE	1998-06-17
REMARK SCORE	?
S 19 S 2
S 20 N 3
M 21 L 4
A 22 N 5
Y 23 V 6
A 24 E 7
Y 25 R 8
L 26 V 9
K 27 L 10
R 28 S 11
Q 29 V 12
L 30 H 13
G 31 H 14
V 32 W 15
D 33 N 16
A 34 D 17
Q 35 T 18
A 36 L 19
V 37 F 20
A 38 S 21
L 39 F 22
G 40 K 23
N 41 T 24
P 42 T 25
N 43 R 26
E 44 N 27
E 45 P 28
T 46 S 29
A 47 Q 36
F 48 F 37
V 49 V 38
L 50 M 39
D 51 I 40
Y 52 G 41
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G 54 E 43
I 55 V 44
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A 57 G 46
P 58 R 47
P 59 P 48
V 60 L 49
V 61 M 50
K 62 P 58
S 63 N 59
A 64 Y 60
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E 67 H 63
G 68 L 64
A 69 E 65
K 70 F 66
Q 71 F 67
V 72 S 68
I 73 I 69
L 74 K 70
T 75 V 71
D 76 Q 72
H 77 N 73
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E 79 P 75
F 80 L 76
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R 88 K 84
E 89 E 85
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E 94 M 90
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D 97 V 100
H 98 T 101
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R 100 D 103
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N 103 P 106
F 104 G 107
E 105 K 108
T 106 H 109
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N 108 Y 111
P 109 M 112
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Y 111 S 114
M 112 T 115
R 113 G 116
L 114 T 117
E 115 G 118
P 116 L 119
V 117 A 120
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S 122 I 126
I 123 Q 127
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Y 125 P 129
R 126 E 130
L 127 V 131
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K 129 E 133
E 130 R 134
N 131 F 135
G 132 E 136
V 133 K 137
A 134 V 138
I 135 V 139
P 136 L 140
K 137 I 141
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I 139 G 143
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G 141 R 145
V 142 Q 146
M 143 V 147
L 144 N 148
S 145 E 149
G 146 L 150
L 147 A 151
I 148 Y 152
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D 150 Q 154
T 151 F 155
L 152 I 156
L 153 T 157
L 154 E 158
K 155 H 159
S 156 L 160
P 157 P 161
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T 159 S 163
H 160 E 164
A 161 K 173
S 162 L 174
D 163 I 175
P 164 Y 176
A 165 Y 177
V 166 P 178
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E 168 V 180
D 169 T 181
L 170 R 182
A 171 E 183
K 172 S 184
I 173 F 185
A 174 H 186
G 175 N 187
V 176 Q 188
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E 180 T 192
Y 181 D 193
G 182 L 194
L 183 M 195
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M 185 S 197
L 186 G 198
K 187 K 199
A 188 L 200
G 189 F 201
T 190 E 202
N 191 D 203
L 192 I 204
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S 194 L 206
K 195 P 207
T 196 P 208
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Q 199 P 211
L 200 Q 212
V 201 D 213
D 202 D 214
I 203 R 215
D 204 A 216
A 205 M 217
K 206 I 218
T 207 L 225
F 208 D 226
E 209 E 227
L 210 S 228
N 211 C 229
G 212 E 230
S 213 V 231
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V 215 D 233
R 216 G 234
V 217 F 235
A 218 G 236
Q 219 L 237
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N 221 I 239
T 222 S 240
V 223 P 241
D 224 R 242
I 225 M 243
N 226 G 244
E 227 E 245
V 228 P 246
L 229 G 247
E 230 D 248
R 231 Y 249
Q 232 L 250
N 233 I 251
TER
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