
PFRMAT AL
TARGET T0088
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.95 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: gluts
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  2
PARENT 2gsr_A
E   9     M    35 
N  10     E    36 
D  11     T    37 
V  12     W    38 
G  13     P    39 
Q  16     P    40 
G  17     L    41 
S  18     K    42 
Y  19     P    43 
S  20     S    44 
H  23     C    45 
A  24     L    46 
M  25     F    47 
D  26     R    48 
N  27     Q    49 
L  28     L    50 
P  29     P    51 
F  30     K    52 
V  31     F    53 
Y  32     Q    54 
N  33     D    55 
T  34     G    56 
G  35     D    57 
Y  36     L    58 
N  37     T    59 
I  38     L    60 
G  39     Y    61 
Y  40     Q    62 
Q  41     S    63 
N  42     N    64 
A  43     A    65 
N  44     I    66 
V  45     L    67 
W  46     R    68 
R  47     H    69 
I  48     L    70 
S  49     G    71 
G  50     R    72 
G  51     S    73 
F  52     F    74 
C  53     G    75 
V  54     L    76 
G  55     Y    77 
L  56     G    78 
D  57     K    79 
G  58     D    80 
K  59     Q    81 
V  60     K    82 
D  61     E    83 
L  62     A    84 
P  63     A    85 
V  64     L    86 
V  65     V    87 
G  66     D    88 
S  67     M    89 
L  68     V    90 
D  69     N    91 
Q  71     D    92 
S  72     G    93 
I  73     V    94 
Y  74     E    95 
G  75     D    96 
L  76     L    97 
T  77     R    98 
E  78     C    99 
E  79     K   100 
V  80     Y   101 
G  81     A   102 
L  82     T   103 
L  83     L   104 
I  84     I   105 
W  85     Y   106 
G  87     T   107 
N  90     N   108 
Y  91     Y   109 
S  92     E   110 
R  93     A   111 
G  94     G   112 
T  95     K   113 
A  96     E   114 
M  97     K   115 
S  98     Y   116 
G  99     V   117 
N 100     K   118 
S 101     E   119 
W 102     L   120 
E 103     P   121 
N 104     E   122 
F 106     H   123 
S 107     L   124 
G 108     K   125 
W 109     P   126 
C 110     F   127 
V 111     E   128 
G 112     T   129 
N 113     L   130 
Y 114     L   131 
V 115     S   132 
S 116     Q   133 
T 117     N   134 
Q 118     Q   135 
G 119     G   136 
L 120     I   159 
S 121     H   160 
V 122     Q   161 
H 123     V   162 
V 124     L   163 
R 125     N   164 
P 126     P   165 
V 127     S   166 
I 128     C   167 
L 129     L   168 
K 130     D   169 
R 131     A   170 
N 132     F   171 
S 133     P   172 
S 134     L   173 
A 135     L   174 
Q 136     S   175 
Y 137     A   176 
S 138     Y   177 
V 139     V   178 
Q 140     A   179 
K 141     R   180 
T 142     L   181 
S 143     S   182 
G 145     A   183 
S 146     R   184 
I 147     P   185 
R 148     K   186 
M 149     I   187 
R 150     K   188 
P 151     A   189 
Y 152     F   190 
N 153     L   191 
G 154     A   192 
S 155     S   193 
S 156     P   194 
TER
END

