
PFRMAT AL
TARGET T0088
AUTHOR 3092-8926-3558
METHOD PDB BLAST http://bioinformatics.ljcrf.edu/pdb_blast/
METHOD 1) Use PSI-Blast to collect homologs and create a sequence profile
METHOD    for the family.
METHOD 2) Use created profile to search for related proteins in PDB
MODEL  2
PARENT 1MPR_A
REMARK DATE	1997-03-13
REMARK SCORE	 2.3	25.8	17/52 (32%)
S 15 S 250
Q 16 D 251
G 17 G 252
S 18 S 253
Y 19 S 254
S 20 S 255
S 21 F 256
T 22 T 257
H 23 E 258
F 30 K 265
V 31 I 266
N 33 N 267
T 34 Y 268
G 35 A 269
Y 36 N 270
N 37 K 271
I 38 V 272
G 39 I 273
Y 40 N 274
Q 41 N 275
N 42 N 276
A 43 G 277
N 44 N 278
V 45 M 279
W 46 W 280
R 47 R 281
I 48 I 282
S 49 L 283
G 50 D 284
G 51 H 285
F 52 G 286
C 53 A 287
V 54 I 288
G 55 S 289
L 56 L 290
D 57 G 291
G 58 D 292
K 59 K 293
V 60 W 294
D 61 D 295
L 62 L 296
P 63 M 297
V 64 Y 298
V 65 V 299
G 66 G 300
TER
END

