
PFRMAT AL
TARGET T0088
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  1
PARENT 1BTE_A
REMARK DATE	1999-12-28
REMARK SCORE	?
Y 40 F 13
Q 41 F 14
N 42 N 15
A 43 A 16
N 44 N 17
V 45 W 18
W 46 E 19
R 47 R 20
I 48 D 21
S 49 R 22
G 50 T 23
G 51 N 24
F 52 Q 25
C 53 T 26
V 54 G 27
G 55 V 28
L 56 E 29
D 57 G 33
L 62 R 38
P 63 R 39
V 64 H 40
V 65 C 41
G 66 F 42
S 67 A 43
L 68 T 44
D 69 W 45
G 70 K 46
Q 71 N 47
S 72 I 48
I 73 S 49
Y 74 G 50
G 75 S 51
L 76 I 52
T 77 E 53
E 78 I 54
E 79 V 55
V 80 K 56
G 81 Q 57
L 82 G 58
L 83 C 59
I 84 W 60
W 85 L 61
M 86 D 62
G 87 D 63
D 88 I 64
T 89 N 65
N 90 Y 67
Y 91 D 68
S 92 R 69
R 93 T 70
G 94 D 71
T 95 C 72
A 96 I 73
M 97 E 74
S 98 K 75
G 99 K 76
N 100 D 77
S 101 S 78
W 102 P 79
E 103 E 80
N 104 V 81
V 105 Y 82
F 106 F 83
S 107 C 84
G 108 C 85
W 109 C 86
C 110 E 87
V 111 G 88
G 112 N 89
N 113 M 90
TER
END

