
PFRMAT AL
TARGET T0089
AUTHOR 2650-8406-4261
REMARK Target Was Recognized by BLAST, SDP and DDP
REMARK DDP Alignments tend to be better, so we will go with that
REMARK The DDP was used as a prior with varied sequence info included
REMARK Domain 1 - 1.4/.2/.1 Domain 2 - 2.5/.3/.2
REMARK Alignment was done in domain segments and then spliced together
METHOD This pairwise alignment was produced using the DDP Method
METHOD Fold Choice was validated by BLAST,SDP
MODEL 1
PARENT 3hsc
I 13 I 9
D 14 D 10
I 15 L 11
G 16 G 12
S 17 T 13
R 18 T 14
Y 19 Y 15
I 20 S 16
V 24 C 17
L 25 V 18
G 26 G 19
K 27 V 20
R 28 F 21
D 29 Q 22
Q 30 H 23
E 31 K 25
W 32 V 26
E 33 E 27
A 34 I 28
L 35 I 29
A 36 A 30
F 37 N 31
S 38 D 32
S 39 Q 33
K 41 G 34
S 42 N 35
R 43 R 36
D 46 T 37
E 47 T 38
G 48 P 39
D 52 S 40
A 53 Y 41
I 54 V 42
A 55 A 43
F 56 F 44
K 57 T 45
E 58 D 46
S 59 T 47
E 68 E 48
E 69 R 49
Q 70 L 50
L 71 I 51
Q 72 G 52
K 73 D 53
S 74 A 54
L 75 A 55
R 76 K 56
S 77 N 57
D 78 Q 58
V 80 V 59
I 81 A 60
S 82 M 61
F 83 N 62
S 84 P 63
S 85 T 64
V 86 N 65
S 87 T 66
F 88 V 67
E 89 F 68
R 90 D 69
E 91 A 70
D 92 K 71
T 93 R 72
V 94 L 73
I 95 I 74
E 96 G 75
R 97 R 76
D 98 R 77
F 99 F 78
G 100 D 79
E 101 D 80
S 112 A 81
E 113 V 82
M 114 V 83
Q 115 Q 84
S 116 S 85
E 117 D 86
L 119 M 87
E 120 K 88
K 121 H 89
L 122 V 94
K 123 V 95
E 124 N 96
N 125 D 97
G 126 G 99
K 127 R 100
T 128 P 101
P 129 K 102
L 130 V 103
H 131 Q 104
I 132 V 105
F 133 Y 107
S 134 T 111
K 135 K 112
R 136 S 113
Y 137 F 114
L 138 Y 115
L 139 P 116
D 140 E 117
D 141 E 118
E 142 S 120
R 143 S 121
I 144 M 122
V 145 V 123
F 146 L 124
N 147 T 125
P 148 K 126
L 149 M 127
D 150 E 129
M 151 I 130
K 152 A 131
A 153 E 132
S 154 A 133
K 155 Y 134
I 156 L 135
A 157 G 136
I 158 K 137
E 159 T 138
Y 160 V 139
T 161 T 140
S 162 N 141
I 163 V 144
V 164 T 145
V 165 V 146
P 166 P 147
L 167 A 148
K 168 S 153
V 169 Q 154
Y 170 R 155
E 171 Q 156
M 172 A 157
F 173 T 158
Y 174 K 159
N 175 D 160
F 176 A 161
L 177 G 162
Q 178 T 163
D 179 G 166
T 180 N 168
V 181 V 169
F 185 L 170
Q 186 R 171
L 187 I 172
K 188 E 175
S 189 P 176
S 190 T 177
L 191 A 178
V 192 A 179
S 193 A 180
T 194 I 181
A 195 A 182
E 196 Y 183
G 197 G 184
V 198 L 185
L 199 D 186
T 200 K 187
T 201 K 188
P 202 V 189
E 203 G 190
TER
PARENT 3hsc
K 204 A 191
D 205 E 192
R 206 R 193
G 207 N 194
V 208 V 195
V 209 L 196
V 210 I 197
V 211 F 198
N 212 D 199
L 213 L 200
G 214 G 201
Y 215 F 205
N 216 D 206
F 217 V 207
T 218 S 208
L 220 I 209
I 221 L 210
A 222 T 211
Y 223 I 212
K 224 E 213
N 225 D 214
G 226 G 215
V 227 I 216
I 229 F 217
K 230 E 218
I 231 V 219
S 232 K 220
V 234 S 221
P 235 T 222
V 236 A 223
G 237 G 224
M 238 D 225
K 239 T 226
H 240 H 227
V 241 L 228
I 242 F 233
K 243 D 234
D 244 N 235
V 245 M 237
S 246 V 238
A 247 N 239
V 248 H 240
L 249 F 241
D 250 I 242
T 251 A 243
S 252 E 244
F 253 F 245
E 254 K 246
E 255 R 247
S 256 S 254
E 257 E 255
R 258 R 262
L 259 L 263
I 260 R 264
T 262 T 265
H 263 A 266
G 264 C 267
N 265 E 268
A 266 R 269
V 267 A 270
Y 268 K 271
N 269 R 272
D 270 T 273
L 271 L 274
K 272 S 275
E 273 S 276
E 274 S 277
E 275 S 281
I 276 I 282
Q 277 E 283
Y 278 I 284
R 279 D 285
G 280 S 286
L 281 L 287
D 282 E 289
G 283 G 290
N 284 I 291
T 285 D 292
I 286 F 293
K 287 Y 294
T 288 T 295
T 289 S 296
T 290 I 297
A 291 T 298
K 292 R 299
A 300 A 300
R 301 R 301
L 302 F 302
R 303 E 303
E 304 E 304
I 305 L 305
M 306 N 306
S 307 A 307
K 311 D 308
F 312 L 309
F 313 F 310
R 314 R 311
E 315 G 312
V 316 L 314
E 317 D 315
A 318 E 318
K 319 K 319
I 320 A 320
V 321 L 321
E 322 R 322
E 323 D 323
G 324 A 324
E 325 K 325
I 326 L 326
G 327 D 327
I 328 K 328
P 329 S 329
G 330 Q 330
G 331 D 333
V 332 I 334
V 333 V 335
L 334 L 336
T 335 V 337
G 336 G 338
G 337 G 339
G 338 S 340
A 339 T 341
K 340 R 342
I 341 I 343
P 342 P 344
R 343 K 345
I 344 I 346
N 345 Q 347
E 346 K 348
L 347 L 349
A 348 L 350
T 349 Q 351
E 350 D 352
V 351 F 353
F 352 F 354
K 353 N 355
S 354 N 364
P 355 P 365
V 356 D 366
R 357 E 367
T 358 A 368
G 359 V 369
C 360 A 370
Y 361 Y 371
A 362 G 372
N 363 A 373
S 364 A 374
D 365 V 375
R 366 Q 376
P 367 A 377
S 368 A 378
I 369 I 379
I 370 L 380
N 371 S 381
A 372 G 382
D 373 D 383
E 374 K 384
TER
END


