
PFRMAT AL
TARGET T0090
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.69 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: DEFSN
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  4
PARENT 1bnb
L   7     A     1
P   8     P     2
V   9     L     3
T  10     S     4
F  11     C     5
G  12     G     6
K  13     R     7
N  14     N     8
D  15     G     9
V  16     G    10
E  17     V    11
I  18     C    12
I  19     I    13
A  20     P    14
R  21     I    15
E  22     R    16
F  29     C    17
S  30     P    18
L  31     V    19
D  32     P    20
L  33     M    21
Y  34     R    22
R  35     Q    23
F  36     I    24
R  37     G    25
H  38     T    26
R  39     C    27
L  40     F    28
F  41     G    29
N  42     R    30
M  45     P    31
S  46     V    32
H  47     K    33
E  48     C    34
V  49     C    35
R  50     R    36
R  51     S    37
E  52     W    38
TER
END

