
PFRMAT AL
TARGET T0090
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 1
PARENT 1mut
E   55 M 1
R   56 K 2
G   57 K 3
H   58 L 4
A   59 Q 5
A   60 I 6
V   61 A 7
L   62 V 8
L   63 G 9
P   64 I 10
F   65 I 11
D   66 R 12
P   67 N 13
V   68 E 14
R   69 N 15
D   70 N 16
E   71 E 17
V   72 I 18
V   73 F 19
L   74 I 20
I   75 T 21
E   76 R 22
Q   77 R 23
Y   83 A 24
D   84 A 25
T   85 D 26
S   86 A 27
E   87 H 28
T   88 M 29
P   89 A 30
W   90 N 31
L   91 K 32
L   92 L 33
E   93 E 34
M   94 F 35
V   95 P 36
A   96 G 37
G   97 G 38
M   98 K 39
I   99 I 40
E  100 E 41
E  101 M 42
G  102 G 43
E  103 E 44
S  104 T 45
V  105 P 46
E  106 E 47
D  107 Q 48
V  108 A 49
A  109 V 50
R  110 V 51
R  111 R 52
E  112 E 53
A  113 L 54
I  114 Q 55
E  115 E 56
E  116 E 57
A  117 V 58
G  118 G 59
L  119 I 60
I  120 T 61
V  121 P 62
K  122 Q 63
R  123 H 64
T  124 F 65
K  125 S 66
P  126 L 67
V  127 F 68
L  128 E 69
S  129 K 70
F  130 L 71
L  131 Y 73
A  132 E 74
S  133 F 75
P  134 P 76
S  138 D 77
E  139 R 78
R  140 H 79
S  141 I 80
S  142 T 81
I  143 L 82
M  144 W 83
V  145 F 84
G  146 W 85
E  147 L 86
V  148 V 87
D  149 E 88
A  150 R 89
T  151 W 90
T  152 E 91
A  153 G 92
S  154 E 93
G  155 P 94
I  156 W 95
H  157 G 96
G  158 K 97
L  159 E 98
A  160 G 99
D  161 Q 100
E  162 P 101
N  163 G 102
E  164 E 103
D  165 W 104
I  166 M 105
R  167 S 106
V  168 L 107
H  169 V 108
V  170 G 109
V  171 L 110
S  172 P 117
R  173 A 118
E  174 N 119
Q  175 E 120
A  176 V 122
Y  177 I 123
Q  178 A 124
W  179 K 125
V  180 L 126
E  181 K 127
E  182 R 128
G  183 L 129
TER
END

