
PFRMAT AL
TARGET T0090
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.99 
REMARK CONFIDENCE: GUESS     (50% confidence [ ZSCORE>=3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: ADF
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  2
PARENT 1ak6
M   1     M    -7
L   2     I    -6
K   3     T    -5
P   4     P    -4
D   5     S    -3
N   6     S    -2
G  12     G    -1
K  13     N     0
N  14     S     1
D  15     A     2
V  16     S     3
E  17     G     4
I  18     V     5
I  19     Q     6
A  20     V     7
R  21     A     8
E  22     D     9
T  23     E    10
L  24     V    11
Y  25     C    12
R  26     R    13
G  27     I    14
F  28     F    15
F  29     Y    16
S  30     D    17
L  31     M    18
D  32     K    19
L  33     V    20
Y  34     R    21
R  35     K    22
F  36     C    23
R  37     S    24
R  50     T    25
R  51     P    26
E  52     E    27
I  53     E    28
F  54     I    29
E  55     K    30
R  56     K    31
G  57     R    32
H  58     K    33
A  59     K    34
A  60     A    35
V  61     V    36
L  62     I    37
L  63     F    38
P  64     C    39
F  65     L    40
D  66     S    41
P  67     A    42
V  68     D    43
R  69     K    44
D  70     K    45
E  71     C    46
V  72     I    47
V  73     I    48
L  74     V    49
I  75     E    50
E  76     E    51
Q  77     G    52
I  78     K    53
R  79     E    54
I  80     I    55
A  81     L    56
A  82     V    57
Y  83     G    58
D  84     D    59
T  85     V    60
S  86     G    61
E  87     V    62
T  88     T    63
P  89     T    65
W  90     D    66
L  91     P    67
L  92     F    68
E  93     K    69
M  94     H    70
V  95     F    71
A  96     V    72
G  97     G    73
M  98     M    74
I  99     L    75
E 100     P    76
E 101     E    77
G 102     K    78
E 103     D    79
S 104     C    80
D 107     R    81
V 108     Y    82
A 109     A    83
R 110     L    84
R 111     Y    85
E 112     D    86
A 113     A    87
I 114     S    88
E 115     F    89
E 116     E    90
A 117     T    91
G 118     K    92
V 121     E    93
K 122     S    94
R 123     R    95
T 124     K    96
K 125     E    97
P 126     E    98
V 127     L    99
L 128     M   100
S 129     F   101
F 130     F   102
L 131     L   103
A 132     W   104
S 133     A   105
P 134     P   106
G 135     E   107
G 136     L   108
T 137     A   109
S 138     P   110
E 139     L   111
R 140     K   112
S 141     S   113
S 142     K   114
I 143     M   115
M 144     I   116
V 145     Y   117
G 146     A   118
E 147     S   119
V 148     S   120
D 149     K   121
A 150     D   122
T 151     A   123
T 152     I   124
A 153     K   125
S 154     K   126
G 155     K   127
I 156     F   128
H 157     Q   129
G 158     G   130
L 159     I   131
A 160     K   132
D 161     H   133
E 162     E   134
N 163     C   135
E 164     Q   136
D 165     A   137
I 166     N   138
R 167     G   139
V 168     P   140
H 169     E   141
V 170     D   142
V 171     L   143
S 172     N   144
R 173     R   145
E 174     A   146
Q 175     C   147
A 176     I   148
Y 177     A   149
Q 178     E   150
W 179     K   151
V 180     L   152
E 181     G   153
E 182     G   154
G 183     S   155
K 184     L   156
I 185     I   157
Q 202     V   158
A 203     A   159
L 204     F   160
K 205     E   161
N 206     G   162
E 207     C   163
W 208     P   164
A 209     V   165
TER
END

