
PFRMAT AL
TARGET T0090
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  3
PARENT 1atg
R 21 Y 41
E 22 A 42
T 23 Q 43
L 24 I 44
Y 25 V 45
R 26 N 46
G 27 G 47
F 28 A 48
F 29 F 53
S 30 F 54
L 31 S 55
D 32 A 56
L 33 D 57
Y 34 E 58
R 35 K 59
F 36 S 60
R 37 P 61
H 38 E 62
R 39 K 63
L 40 L 64
F 41 D 65
N 42 N 66
G 43 Q 67
Q 44 G 68
M 45 F 69
S 46 A 70
H 47 L 71
E 48 P 72
V 49 G 73
R 50 S 74
R 51 R 75
E 52 F 76
I 53 T 77
F 54 Y 78
E 55 A 79
R 56 I 80
G 57 G 81
H 58 K 82
A 59 L 83
A 60 V 84
V 61 L 85
L 62 W 86
L 63 S 87
P 64 A 88
F 65 L 92
D 66 V 93
P 67 D 94
V 68 N 95
R 69 Q 96
D 70 G 97
E 71 K 98
V 72 V 99
V 73 L 100
L 74 A 101
E 93 G 102
M 94 N 103
V 95 G 104
A 96 W 105
G 97 R 106
M 98 H 107
I 99 I 108
E 100 N 112
E 101 P 113
G 102 Q 114
E 103 I 115
S 104 A 116
V 105 P 117
E 106 Y 118
D 107 G 119
V 108 L 120
A 109 A 121
R 110 G 122
R 111 T 123
E 112 Q 124
A 113 V 125
I 114 L 126
E 115 T 127
E 116 H 128
A 117 L 129
G 118 G 130
L 119 L 131
K 122 D 133
R 123 K 134
T 124 L 135
K 125 T 136
P 126 A 137
V 127 Q 138
L 128 E 139
S 129 R 140
F 130 I 141
L 131 V 142
A 132 E 143
S 133 A 144
P 134 N 145
G 135 S 146
G 136 V 147
T 137 G 148
S 138 Q 149
E 139 A 150
R 140 H 151
S 141 S 152
S 142 Q 153
I 143 T 154
M 144 A 155
V 145 S 156
G 146 G 157
E 147 A 158
V 148 A 159
D 149 D 160
A 150 L 161
T 151 G 162
T 152 F 163
A 153 V 164
S 154 A 165
G 155 L 166
I 156 A 167
H 157 Q 168
G 158 I 169
L 159 I 170
A 160 Q 171
D 161 A 172
E 162 A 173
N 163 A 174
E 164 K 175
D 165 I 176
I 166 P 177
R 167 G 178
V 168 S 179
H 169 H 180
V 170 W 181
V 171 F 182
S 172 P 183
R 173 P 184
E 174 A 185
Q 175 N 186
A 176 Y 187
Y 177 Y 188
Q 178 E 189
W 179 P 190
V 180 I 191
E 181 V 192
E 182 Q 193
G 183 Q 194
K 184 A 195
I 185 V 196
D 186 E 203
N 187 K 204
A 188 A 205
A 189 N 206
S 190 A 207
V 191 E 208
I 192 Q 209
A 193 F 210
L 194 M 211
Q 195 S 212
W 196 W 213
L 197 M 214
Q 198 K 215
TER
END

