
PFRMAT AL
TARGET T0092
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=4.76 
REMARK CONFIDENCE: MARGINAL  (90% confidence [ ZSCORE>=4.7 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1pjca1
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  4
PARENT 1pjc_A
F  19     A   136
D  20     G   137
E  21     R   138
N  22     L   139
V  23     S   140
A  24     V   141
E  25     Q   142
V  26     F   143
F  27     G   144
P  28     A   145
D  29     R   146
M  30     F   147
I  31     L   148
Q  32     E   149
R  33     R   150
S  34     Q   151
V  35     Q   152
P  36     G   153
G  37     G   154
Y  38     R   155
S  39     G   156
N  40     V   157
M  47     L   158
L  48     L   159
A  49     G   160
E  50     G   161
R  51     V   162
F  52     P   163
V  53     G   164
T  54     V   165
A  55     K   166
D  56     P   167
S  57     G   168
N  58     K   169
V  59     V   170
Y  60     V   171
D  61     I   172
L  62     L   173
G  63     G   174
C  64     G   175
G  67     G   176
A  68     V   177
A  69     V   178
T  70     G   179
L  71     T   180
S  72     E   181
A  73     A   182
R  74     A   183
R  75     K   184
N  76     M   185
I  77     A   186
N  78     V   187
Q  79     G   188
P  80     L   189
N  81     G   190
V  82     A   191
K  83     Q   192
I  84     V   193
I  85     Q   194
G  86     I   195
I  87     F   196
D  88     D   197
N  89     I   198
S  90     N   199
Q  91     V   200
P  92     E   201
M  93     R   202
V  94     L   203
E  95     S   204
R  96     Y   205
C  97     L   206
R  98     E   207
Q  99     T   208
H 100     L   209
I 101     F   210
A 102     G   211
A 103     S   212
Y 104     R   213
V 110     V   214
E 111     E   215
I 112     L   216
L 113     L   217
C 114     Y   218
N 115     S   219
D 116     N   220
I 117     S   221
R 118     A   222
H 119     E   223
V 120     I   224
E 121     E   225
I 122     T   226
K 123     A   227
N 124     V   228
A 125     A   229
S 126     E   230
M 127     A   231
V 128     D   232
I 129     L   233
L 130     L   234
N 131     I   235
F 132     G   236
T 133     A   237
L 134     V   238
Q 135     L   239
F 136     V   240
L 137     P   241
P 138     G   242
P 139     R   243
E 140     R   244
D 141     A   245
R 142     P   246
I 143     I   247
A 144     L   248
L 145     V   249
L 146     P   250
T 147     A   251
K 148     S   252
I 149     L   253
Y 150     V   254
E 151     E   255
G 152     Q   256
L 153     M   257
N 154     R   258
P 155     T   259
N 156     G   260
G 157     S   261
V 158     V   262
L 159     I   263
V 160     V   264
L 161     D   265
S 162     V   266
E 163     A   267
K 164     V   268
Q 196     D   269
K 197     Q   270
R 198     G   271
T 199     G   272
A 200     C   273
L 201     V   274
E 202     E   275
N 203     T   276
V 204     L   277
M 205     H   278
R 206     P   279
T 207     T   280
D 208     S   281
S 209     H   282
I 210     T   283
E 211     Q   284
T 212     P   285
H 213     T   286
K 214     Y   287
V 215     E   288
R 216     V   289
L 217     F   290
K 218     G   291
N 219     V   292
V 220     V   293
G 221     H   294
F 222     Y   295
S 223     G   296
Q 224     V   297
V 225     P   298
E 226     N   299
L 227     M   300
W 228     P   301
F 229     G   302
Q 230     A   303
TER
END

