
PFRMAT AL
TARGET T0092
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 3
PARENT 2erc_A
S   39 Q 10
N   40 N 11
I   41 F 12
I   42 I 13
T   43 T 14
A   44 N 18
I   45 I 19
G   46 D 20
M   47 K 21
L   48 I 22
A   49 M 23
E   50 T 24
R   51 N 25
F   52 I 26
V   53 L 28
T   54 N 29
A   55 E 30
D   56 H 31
S   57 D 32
N   58 N 33
V   59 I 34
Y   60 F 35
D   61 E 36
L   62 I 37
G   63 G 38
C   64 S 39
S   65 G 40
R   66 K 41
G   67 G 42
A   68 H 43
A   69 F 44
T   70 T 45
L   71 L 46
S   72 E 47
A   73 L 48
R   74 V 49
R   75 Q 50
P   80 R 51
N   81 C 52
V   82 N 53
K   83 F 54
I   84 V 55
I   85 T 56
G   86 A 57
I   87 I 58
D   88 E 59
N   89 I 60
S   90 D 61
Q   91 H 62
P   92 K 63
M   93 L 64
V   94 C 65
E   95 K 66
R   96 T 67
C   97 T 68
R   98 E 69
Q   99 N 70
H  100 K 71
I  101 L 72
A  102 V 73
A  103 D 74
Y  104 H 75
H  105 P 91
S  106 K 92
E  107 N 93
I  108 Q 94
P  109 S 95
V  110 Y 96
E  111 K 97
I  112 I 98
L  113 F 99
C  114 G 100
N  115 N 101
D  116 I 102
I  117 P 103
R  118 Y 104
H  119 N 105
V  120 S 118
E  121 I 119
I  122 A 120
K  123 D 121
N  124 E 122
A  125 I 123
S  126 Y 124
M  127 I 126
V  128 V 127
I  129 E 128
L  130 Y 129
N  131 G 130
F  132 F 131
T  133 A 132
L  134 K 133
Q  135 R 134
F  136 L 135
L  137 L 136
P  138 N 137
P  139 T 138
E  140 K 139
D  141 R 140
R  142 S 141
I  143 L 142
A  144 A 143
L  145 L 144
L  146 F 145
T  147 L 146
K  148 M 147
I  149 A 148
Y  150 E 149
E  151 E 161
G  152 Y 162
L  153 F 163
N  154 H 164
P  155 P 165
N  156 S 171
G  157 S 172
V  158 L 173
L  159 I 174
V  160 R 175
L  161 L 176
S  162 N 177
E  163 R 178
K  164 R 182
F  165 I 183
R  166 S 184
F  167 H 185
E  168 K 186
D  169 D 187
T  170 Q 189
K  171 K 190
I  172 Y 191
N  173 N 192
H  174 Y 193
L  175 F 194
L  176 V 195
I  177 M 196
D  178 K 197
L  179 W 198
H  180 V 199
H  181 N 200
Q  182 K 201
F  183 E 202
K  184 Y 203
R  185 K 204
A  186 K 205
N  187 I 206
G  188 F 207
Y  189 T 208
S  190 K 209
E  191 N 210
L  192 Q 211
E  193 F 212
V  194 N 213
S  195 N 214
Q  196 S 215
K  197 L 216
R  198 K 217
T  199 H 218
A  200 A 219
L  201 G 220
E  202 I 221
N  203 D 222
V  204 D 223
M  205 L 224
R  206 N 225
T  207 N 226
D  208 I 227
S  209 S 228
I  210 F 229
E  211 E 230
T  212 Q 231
H  213 F 232
K  214 S 234
V  215 L 235
R  216 F 236
L  217 N 237
K  218 S 238
N  219 Y 239
V  220 K 240
G  221 L 241
F  222 F 242
S  223 N 243
Q  224 K 244
TER
END

