
PFRMAT AL
TARGET T0092
AUTHOR 3092-8926-3558
METHOD PDB BLAST http://bioinformatics.ljcrf.edu/pdb_blast/
METHOD 1) Use PSI-Blast to collect homologs and create a sequence profile
METHOD    for the family.
METHOD 2) Use created profile to search for related proteins in PDB
MODEL  2
PARENT 1d2c_A
F 19 Y 21
D 20 A 22
E 21 D 23
N 22 G 24
V 23 E 25
A 24 A 26
E 25 A 27
V 26 R 28
F 27 V 29
P 28 W 30
D 29 Q 31
M 30 L 32
I 31 Y 33
Q 32 D 36
R 33 T 37
S 34 R 38
V 35 S 39
P 36 R 40
G 37 T 41
Y 38 A 42
S 39 E 43
N 40 Y 44
I 41 K 45
I 42 A 46
T 43 W 47
A 44 L 48
I 45 L 49
G 46 G 50
M 47 L 51
L 48 L 52
A 49 R 53
E 50 Q 54
R 51 H 55
F 52 G 56
V 53 C 57
T 54 H 58
N 58 R 59
V 59 V 60
Y 60 L 61
D 61 D 62
L 62 V 63
G 63 A 64
C 64 C 65
S 65 G 66
R 66 T 67
G 67 G 68
A 68 V 69
A 69 D 70
T 70 S 71
L 71 I 72
S 72 M 73
A 73 L 74
R 74 V 75
R 75 E 76
P 80 E 77
N 81 G 78
V 82 F 79
K 83 S 80
I 84 V 81
I 85 T 82
G 86 S 83
I 87 V 84
D 88 D 85
N 89 A 86
S 90 S 87
Q 91 D 88
P 92 K 89
M 93 M 90
V 94 L 91
E 95 K 92
R 96 Y 93
C 97 A 94
R 98 R 98
Q 99 W 99
H 100 N 100
I 101 R 101
A 102 R 102
A 103 K 103
Y 104 E 104
H 105 P 105
S 106 A 106
E 107 F 107
I 108 D 108
P 109 K 109
V 110 W 110
E 111 V 111
I 112 I 112
L 113 E 113
C 114 E 114
N 115 A 115
D 116 N 116
I 117 W 117
R 118 L 118
H 119 T 119
V 120 L 120
E 121 D 123
I 122 V 124
K 123 P 125
N 124 A 126
A 125 G 127
S 126 D 128
M 127 F 130
V 128 D 131
I 129 A 132
L 130 V 133
N 131 I 134
F 132 C 135
T 133 S 139
L 134 F 140
Q 135 A 141
F 136 H 142
L 137 L 143
P 138 P 144
P 139 D 145
E 140 S 151
D 141 E 152
R 142 H 153
I 143 R 154
A 144 L 155
L 145 A 156
L 146 L 157
T 147 K 158
K 148 N 159
I 149 I 160
Y 150 A 161
E 151 S 162
G 152 M 163
L 153 V 164
N 154 R 165
P 155 P 166
N 156 G 167
G 157 G 168
V 158 L 169
L 159 L 170
V 160 V 171
L 161 I 172
TER
END

