
PFRMAT AL
TARGET T0092
AUTHOR 2650-8406-4261
REMARK Target Was Recognized by Blast & DDP + MSA
REMARK DDP Alignments tend to be better, so we will go with that
REMARK The DDP was used as a prior with nominal (1/3) sequence information included
REMARK Higher Gap Penalties of 1.25 and .4 were used
REMARK This was a wonky subdomain alignment to 1/2 a rossman fold
METHOD This pairwise alignment was produced using the DDP Method
METHOD Fold Choice was validated by blast
MODEL 1
PARENT 1xva_A
M 30 L 51
I 31 L 52
Q 32 R 53
R 33 Q 54
S 34 H 55
G 37 G 56
Y 38 C 57
S 39 H 58
N 40 R 59
I 41 V 60
I 42 L 61
T 43 D 62
A 44 A 64
I 45 C 65
G 46 G 66
M 47 M 73
L 48 L 74
A 49 V 75
E 50 E 76
R 51 E 77
F 52 F 79
V 53 V 81
T 54 T 82
A 55 S 83
V 59 V 84
D 61 D 85
G 63 A 86
C 64 S 87
S 65 D 88
R 66 K 89
G 67 M 90
A 68 L 91
A 69 K 92
T 70 A 94
L 71 L 95
S 72 K 96
A 73 E 97
R 74 R 98
R 75 W 99
N 76 N 100
N 81 R 101
V 82 R 102
K 83 K 103
Q 91 E 104
P 92 P 105
M 93 A 106
V 94 F 107
E 95 D 108
R 96 K 109
C 97 I 112
R 98 E 113
Q 99 E 114
H 100 A 115
I 101 W 117
A 102 L 118
A 103 T 119
Y 104 L 120
H 105 D 121
S 106 K 122
E 107 D 123
I 108 V 124
P 109 P 125
V 110 A 126
E 111 G 127
D 116 D 128
E 121 G 129
I 122 F 130
K 123 D 131
S 126 A 132
M 127 V 133
V 128 I 134
I 129 C 135
L 130 L 136
N 131 G 137
F 132 N 138
T 133 S 139
L 134 F 140
Q 135 A 141
F 136 H 142
L 137 L 143
P 138 P 144
P 139 Q 150
E 140 S 151
D 141 E 152
R 142 R 154
A 144 L 155
L 145 A 156
L 146 L 157
T 147 K 158
K 148 N 159
I 149 I 160
Y 150 A 161
E 151 S 162
G 152 M 163
L 153 V 164
N 154 R 165
P 155 P 166
N 156 G 167
G 157 G 168
V 158 L 169
L 159 L 170
V 160 V 171
L 161 I 172
S 162 R 175
TER
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