
PFRMAT AL
TARGET T0092
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  1
PARENT 1d2h_D
Y 38 T 41
S 39 A 42
N 40 E 43
I 41 Y 44
I 42 K 45
T 43 A 46
A 44 W 47
I 45 L 48
G 46 L 49
M 47 G 50
L 48 L 51
A 49 L 52
E 50 R 53
R 51 Q 54
T 54 H 55
A 55 G 56
D 56 C 57
S 57 H 58
N 58 R 59
V 59 V 60
Y 60 L 61
D 61 D 62
L 62 V 63
G 63 A 64
C 64 C 65
S 65 G 66
R 66 T 67
G 67 G 68
A 68 V 69
A 69 D 70
T 70 S 71
L 71 I 72
S 72 M 73
A 73 L 74
R 74 V 75
R 75 E 76
N 76 E 77
N 81 G 78
V 82 F 79
K 83 S 80
I 84 V 81
I 85 T 82
G 86 S 83
I 87 V 84
D 88 D 85
N 89 A 86
S 90 S 87
Q 91 D 88
P 92 K 89
M 93 M 90
V 94 L 91
E 95 K 92
R 96 Y 93
C 97 A 94
R 98 L 95
Q 99 K 96
H 100 E 97
I 101 R 98
A 102 W 99
A 103 N 100
Y 104 R 101
H 105 R 102
S 106 K 103
E 107 E 104
I 108 D 108
P 109 K 109
V 110 W 110
E 111 V 111
I 112 I 112
L 113 E 113
C 114 E 114
N 115 A 115
D 116 N 116
I 117 W 117
R 118 L 118
H 119 T 119
V 120 L 120
E 121 D 121
I 122 G 127
K 123 D 128
N 124 G 129
A 125 F 130
S 126 D 131
M 127 A 132
V 128 V 133
I 129 I 134
L 130 C 135
N 131 L 136
F 132 G 137
T 133 S 139
L 134 F 140
Q 135 A 141
F 136 H 142
L 137 L 143
P 138 P 144
P 139 D 145
E 140 S 151
D 141 E 152
R 142 H 153
I 143 R 154
A 144 L 155
L 145 A 156
L 146 L 157
T 147 K 158
K 148 N 159
I 149 I 160
Y 150 A 161
E 151 S 162
G 152 M 163
L 153 V 164
N 154 R 165
P 155 P 166
N 156 G 167
G 157 G 168
V 158 L 169
L 159 L 170
V 160 V 171
L 161 I 172
S 162 D 173
E 163 H 174
K 164 K 175
F 165 N 176
R 166 Y 177
F 167 D 178
E 168 Y 179
D 169 S 182
T 170 T 183
K 171 G 184
I 172 C 185
N 173 A 186
H 174 P 187
L 175 P 188
L 176 G 189
I 177 K 190
D 178 N 191
L 179 I 192
H 180 Y 193
H 181 S 196
Q 182 D 197
F 183 L 198
K 184 T 199
R 185 K 200
A 186 D 201
N 187 I 202
G 188 T 203
Y 189 T 204
S 190 S 205
E 191 V 206
L 192 L 207
E 193 T 208
V 194 V 209
S 195 G 226
Q 196 A 227
K 197 G 228
R 198 R 229
T 199 D 230
A 200 G 231
L 201 A 232
E 202 P 233
N 203 G 234
V 204 F 235
M 205 S 236
R 206 K 237
T 207 F 238
D 208 R 239
I 210 L 247
E 211 A 248
T 212 S 249
H 213 F 250
K 214 T 251
V 215 E 252
R 216 L 253
L 217 V 254
K 218 Q 255
N 219 E 256
V 220 A 257
TER
END

