
PFRMAT AL
TARGET T0092
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  2
PARENT 1vid
E 21 L 26
N 22 E 27
V 23 A 28
A 24 I 29
E 25 D 30
V 26 T 31
F 27 Y 32
P 28 C 33
D 29 T 34
M 30 Q 35
I 31 K 36
Q 32 E 37
R 33 W 38
S 34 A 39
V 35 M 40
P 36 N 41
G 37 V 42
Y 38 G 43
S 39 D 44
N 40 A 45
I 41 K 46
I 42 G 47
T 43 Q 48
A 44 I 49
I 45 M 50
G 46 D 51
M 47 A 52
L 48 V 53
A 49 I 54
E 50 R 55
V 53 E 56
T 54 Y 57
A 55 S 58
D 56 P 59
S 57 S 60
N 58 L 61
V 59 V 62
Y 60 L 63
D 61 E 64
L 62 L 65
G 63 G 66
C 64 A 67
S 65 Y 68
R 66 C 69
G 67 G 70
A 68 Y 71
A 69 S 72
T 70 A 73
L 71 V 74
S 72 R 75
A 73 M 76
R 74 A 77
R 75 R 78
N 76 L 79
I 77 L 80
N 78 Q 81
P 80 P 82
N 81 G 83
V 82 A 84
K 83 R 85
I 84 L 86
I 85 L 87
G 86 T 88
I 87 M 89
D 88 E 90
N 89 M 91
S 90 N 92
Q 91 P 93
P 92 D 94
M 93 Y 95
V 94 A 96
E 95 A 97
R 96 I 98
C 97 T 99
R 98 Q 100
Q 99 Q 101
H 100 M 102
I 101 L 103
A 102 N 104
A 103 F 105
Y 104 A 106
H 105 G 107
S 106 L 108
E 107 Q 109
I 108 D 110
P 109 K 111
V 110 V 112
E 111 T 113
I 112 I 114
L 113 L 115
C 114 N 116
N 115 G 117
D 116 A 118
I 117 S 119
R 118 Q 120
H 119 D 121
V 120 L 122
E 121 D 131
I 122 V 132
K 123 D 133
N 124 T 134
A 125 L 135
S 126 D 136
M 127 M 137
V 128 V 138
I 129 F 139
L 130 L 140
N 131 D 141
F 132 H 142
T 133 W 143
L 134 K 144
Q 135 D 145
F 136 R 146
L 137 Y 147
P 138 L 148
P 139 P 149
I 143 D 150
A 144 T 151
L 145 L 152
L 146 L 153
T 147 L 154
K 148 E 155
I 149 K 156
Y 150 C 157
E 151 G 158
G 152 L 159
L 153 L 160
N 154 R 161
P 155 K 162
N 156 G 163
G 157 T 164
V 158 V 165
L 159 L 166
V 160 L 167
L 161 A 168
S 162 D 169
E 163 N 170
K 164 V 171
F 165 I 172
R 166 V 173
F 167 P 174
E 168 G 175
D 169 T 176
T 170 P 177
K 171 D 178
I 172 F 179
N 173 L 180
H 174 A 181
L 175 Y 182
L 176 V 183
N 187 R 184
G 188 G 185
Y 189 S 186
S 190 S 187
E 191 S 188
L 192 F 189
E 193 E 190
V 194 C 191
S 195 T 192
Q 196 H 193
K 197 Y 194
R 198 S 195
T 199 S 196
A 200 Y 197
L 201 L 198
E 202 E 199
N 203 Y 200
V 204 M 201
M 205 K 202
R 206 V 203
T 207 V 204
D 208 D 205
S 209 G 206
I 210 L 207
E 211 E 208
TER
END

