
PFRMAT AL
TARGET T0092
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  3
PARENT 1yub
N 40 T 13
I 41 S 14
I 42 E 15
T 43 K 16
A 44 V 17
I 45 L 18
G 46 N 19
M 47 Q 20
L 48 I 21
A 49 I 22
E 50 K 23
R 51 Q 24
F 52 L 25
V 53 L 27
T 54 K 28
A 55 E 29
D 56 T 30
S 57 D 31
N 58 T 32
V 59 V 33
Y 60 Y 34
D 61 E 35
L 62 I 36
G 63 G 37
C 64 T 38
S 65 G 39
R 66 K 40
G 67 G 41
A 68 H 42
A 69 L 43
T 70 T 44
L 71 T 45
S 72 K 46
A 73 L 47
R 74 A 48
R 75 K 49
N 76 I 50
N 81 S 51
V 82 K 52
K 83 Q 53
I 84 V 54
I 85 T 55
G 86 S 56
I 87 I 57
D 88 E 58
N 89 L 59
S 90 D 60
Q 91 S 61
P 92 H 62
M 93 L 63
V 94 F 64
E 95 N 65
R 96 L 66
C 97 S 67
R 98 S 68
Q 99 E 69
H 100 K 70
I 101 L 71
A 102 K 72
A 103 L 73
Y 104 N 74
I 108 T 75
P 109 R 76
V 110 V 77
E 111 T 78
I 112 L 79
L 113 I 80
C 114 H 81
N 115 Q 82
D 116 D 83
I 117 I 84
R 118 L 85
H 119 Q 86
V 120 F 87
E 121 Q 88
I 122 F 89
K 123 P 90
N 124 N 91
A 125 K 92
S 126 Q 93
M 127 R 94
V 128 Y 95
I 129 K 96
L 130 I 97
N 131 V 98
F 132 G 99
T 133 N 100
L 134 I 101
Q 135 P 102
F 136 H 104
L 137 L 105
P 138 S 106
P 139 T 107
E 140 Q 108
D 141 I 109
R 142 I 110
I 143 K 111
A 144 K 112
L 145 V 113
L 146 V 114
T 147 F 115
K 148 E 116
I 149 Y 131
Y 150 K 132
E 151 R 133
G 152 T 134
L 153 L 135
N 154 D 136
P 155 I 137
N 156 H 138
G 157 R 139
V 158 T 140
L 159 L 141
V 160 G 142
L 161 L 143
S 162 L 144
E 163 L 145
K 164 H 146
F 165 T 147
R 166 Q 148
F 167 V 149
E 168 S 150
D 169 I 151
T 170 Q 152
K 171 Q 153
I 172 L 154
N 173 L 155
H 174 K 156
L 175 I 173
L 176 K 174
I 177 L 175
D 178 T 176
L 179 R 177
H 180 H 178
H 181 T 179
Q 182 T 180
F 183 D 181
K 184 V 182
R 185 P 183
A 186 D 184
N 187 K 185
G 188 Y 186
Y 189 W 187
S 190 K 188
E 191 L 189
L 192 Y 190
E 193 T 191
V 194 Y 192
S 195 F 193
Q 196 V 194
K 197 S 195
R 198 K 196
T 199 W 197
A 200 V 198
L 201 N 199
E 202 R 200
N 203 E 201
V 204 Y 202
M 205 R 203
R 206 Q 204
T 207 L 205
D 208 F 206
S 209 T 207
I 210 K 208
E 211 N 209
T 212 Q 210
H 213 F 211
K 214 H 212
V 215 Q 213
R 216 A 214
L 217 M 215
K 218 K 216
N 219 H 217
V 220 A 218
G 221 K 219
F 222 V 220
S 223 N 221
Q 224 N 222
V 225 L 223
E 226 S 224
L 227 T 225
W 228 I 226
TER
END

