
PFRMAT AL
TARGET T0092
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  4
PARENT 1qaq_A
N 40 T 14
I 41 S 15
I 42 K 16
T 43 H 17
A 44 N 18
I 45 I 19
G 46 D 20
M 47 K 21
L 48 I 22
A 49 M 23
E 50 T 24
R 51 N 25
F 52 I 26
V 53 L 28
T 54 N 29
A 55 E 30
D 56 H 31
S 57 D 32
N 58 N 33
V 59 I 34
Y 60 F 35
D 61 E 36
L 62 I 37
G 63 G 38
C 64 S 39
S 65 G 40
R 66 K 41
G 67 G 42
A 68 H 43
A 69 F 44
T 70 T 45
L 71 L 46
S 72 E 47
A 73 L 48
R 74 V 49
R 75 Q 50
N 76 R 51
N 81 C 52
V 82 N 53
K 83 F 54
I 84 V 55
I 85 T 56
G 86 A 57
I 87 I 58
D 88 E 59
N 89 I 60
S 90 D 61
Q 91 H 62
P 92 K 63
M 93 L 64
V 94 C 65
E 95 K 66
R 96 T 67
C 97 T 68
R 98 E 69
Q 99 N 70
H 100 K 71
I 101 L 72
A 102 V 73
A 103 D 74
Y 104 H 75
I 108 D 76
P 109 N 77
V 110 F 78
E 111 Q 79
I 112 V 80
L 113 L 81
C 114 N 82
N 115 K 83
D 116 D 84
I 117 I 85
R 118 L 86
H 119 Q 87
V 120 F 88
E 121 K 89
I 122 F 90
K 123 P 91
N 124 K 92
A 125 N 93
S 126 Q 94
M 127 S 95
V 128 Y 96
I 129 K 97
L 130 I 98
N 131 F 99
F 132 G 100
T 133 I 111
L 134 R 112
Q 135 K 113
F 136 I 114
L 137 V 115
P 138 F 116
P 139 D 117
E 140 S 118
D 141 I 119
R 142 A 120
I 143 D 121
A 144 E 122
L 145 I 123
L 146 Y 124
T 147 Y 129
K 148 G 130
I 149 F 131
Y 150 A 132
E 151 R 134
G 152 L 135
L 153 L 136
N 154 N 137
P 155 T 138
N 156 K 139
G 157 R 140
V 158 S 141
L 159 L 142
V 160 A 143
L 161 L 144
S 162 F 145
E 163 L 146
K 164 M 147
F 165 A 148
R 166 E 149
F 167 V 150
E 168 D 151
D 169 I 152
T 170 S 153
K 171 I 154
I 172 L 155
N 173 S 156
H 174 M 157
L 175 I 174
L 176 R 175
I 177 L 176
D 178 N 177
L 179 R 178
H 180 K 179
H 181 K 180
Q 182 S 181
F 183 R 182
K 184 I 183
R 185 S 184
A 186 H 185
N 187 K 186
G 188 D 187
Y 189 K 188
S 190 Q 189
E 191 K 190
L 192 Y 191
E 193 N 192
V 194 Y 193
S 195 F 194
Q 196 V 195
K 197 M 196
R 198 K 197
T 199 W 198
A 200 V 199
L 201 N 200
E 202 K 201
N 203 E 202
V 204 Y 203
M 205 K 204
R 206 K 205
T 207 I 206
D 208 F 207
S 209 T 208
I 210 K 209
E 211 N 210
T 212 Q 211
H 213 F 212
K 214 N 213
V 215 N 214
R 216 S 215
L 217 L 216
K 218 K 217
N 219 H 218
V 220 A 219
G 221 G 220
F 222 I 221
S 223 D 222
Q 224 D 223
V 225 L 224
E 226 N 225
L 227 N 226
W 228 I 227
TER
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