
PFRMAT TS
TARGET T0092
AUTHOR 5477-6509-1337
MODEL 2 UNREFINED
REMARK
REMARK   Work performed by Kai-Ming Ho, James R. Morris, Cai-Zhuang Wang,
REMARK                   Drena Dobbs, Tzu-Liang Chan, Young-Ok Im,
REMARK                   Josh Koch, Neil Voss
REMARK
REMARK   Acknowledgments to Amy Andreotti and Josh Lapan
REMARK
REMARK   Work supported by Pioneer Hi-Bred, by a Carver Foundation grant
REMARK     from Iowa State University, and a Laboratory Directed 
REMARK     Research and Development grant from Ames Laboratory, U.S.D.O.E.
REMARK
REMARK
METHOD   This structure was obtained originally based upon the sequence homology
METHOD   (found using PDBBLAST) between the target structure and the PDB file 1d2h
METHOD   chain C, for target residues from 19 to 161.  This region was then allowed
METHOD   to relax and re-arrange, and an ab initio prediction was made for the
METHOD   remaining regions using a coarse-grained molecular dynamics model (two beads,
METHOD   one for the backbone and one for the side chain).  The resultant structure
METHOD   has little structural homology with 1d2h, and we therefore submit this as
METHOD   a fully ab initio structure.
METHOD
METHOD   All atom models were generated using the MaxSprout Server (L. Holm,
METHOD   C. Sander (1991) J. Mol. Biol. 218:183-194), using the CA positions
METHOD   from the coarse grained model.  The resulting backbone is broken
METHOD   in a number of places, where the original CA only model was fully
METHOD   connected.  The "unrefined" model contains the original CA trace.
REMARK
REMARK
PARENT N/A
ATOM      1  CA  MET     1      -5.821   8.258  -4.654  1.00  5.00           C
ATOM      2  CA  VAL     2      -3.082   9.501  -7.000  1.00  5.00           C
ATOM      3  CA  LYS     3      -1.316   9.355 -10.379  1.00  5.00           C
ATOM      4  CA  ASP     4      -1.521   5.549 -10.195  1.00  5.00           C
ATOM      5  CA  THR     5       0.339   5.485 -13.526  1.00  5.00           C
ATOM      6  CA  LEU     6       2.954   7.675 -11.815  1.00  5.00           C
ATOM      7  CA  PHE     7       3.246   4.814  -9.308  1.00  5.00           C
ATOM      8  CA  SER     8       3.932   2.582 -12.324  1.00  5.00           C
ATOM      9  CA  THR     9       6.688   5.051 -13.255  1.00  5.00           C
ATOM     10  CA  PRO    10       8.010   2.311 -15.558  1.00  5.00           C
ATOM     11  CA  ILE    11       8.169   0.148 -12.419  1.00  5.00           C
ATOM     12  CA  ALA    12      10.416   2.852 -10.936  1.00  5.00           C
ATOM     13  CA  LYS    13      10.680   0.771  -7.749  1.00  5.00           C
ATOM     14  CA  LEU    14      11.361  -2.300  -9.907  1.00  5.00           C
ATOM     15  CA  GLY    15      14.208  -3.199  -7.509  1.00  5.00           C
ATOM     16  CA  ASP    16      11.882  -2.745  -4.508  1.00  5.00           C
ATOM     17  CA  PHE    17       9.398  -5.070  -6.233  1.00  5.00           C
ATOM     18  CA  ILE    18      10.242  -8.440  -7.808  1.00  5.00           C
ATOM     19  CA  PHE    19       7.453  -9.478 -10.195  1.00  5.00           C
ATOM     20  CA  ASP    20      10.024 -11.573 -12.068  1.00  5.00           C
ATOM     21  CA  GLU    21       7.371 -14.142 -13.025  1.00  5.00           C
ATOM     22  CA  ASN    22       6.124 -14.254  -9.422  1.00  5.00           C
ATOM     23  CA  VAL    23       9.658 -14.805  -8.093  1.00  5.00           C
ATOM     24  CA  ALA    24      10.446 -17.383 -10.793  1.00  5.00           C
ATOM     25  CA  GLU    25      14.006 -16.090 -11.255  1.00  5.00           C
ATOM     26  CA  VAL    26      14.377 -15.467  -7.509  1.00  5.00           C
ATOM     27  CA  PHE    27      15.100 -12.833  -4.846  1.00  5.00           C
ATOM     28  CA  PRO    28      14.952 -10.168  -7.572  1.00  5.00           C
ATOM     29  CA  ASP    29      17.221  -7.286  -6.522  1.00  5.00           C
ATOM     30  CA  MET    30      17.636  -9.112  -3.198  1.00  5.00           C
ATOM     31  CA  ILE    31      21.368  -9.390  -3.943  1.00  5.00           C
ATOM     32  CA  GLN    32      22.017  -8.197  -0.378  1.00  5.00           C
ATOM     33  CA  ARG    33      19.491  -5.394  -0.982  1.00  5.00           C
ATOM     34  CA  SER    34      19.304  -4.753   2.774  1.00  5.00           C
ATOM     35  CA  VAL    35      18.916  -8.501   3.373  1.00  5.00           C
ATOM     36  CA  PRO    36      15.741  -7.561   5.269  1.00  5.00           C
ATOM     37  CA  GLY    37      14.172  -4.697   3.298  1.00  5.00           C
ATOM     38  CA  TYR    38      10.782  -5.425   4.890  1.00  5.00           C
ATOM     39  CA  SER    39      10.083  -8.170   2.335  1.00  5.00           C
ATOM     40  CA  ASN    40      11.228  -5.799  -0.425  1.00  5.00           C
ATOM     41  CA  ILE    41       7.772  -6.376  -1.934  1.00  5.00           C
ATOM     42  CA  ILE    42       5.382  -6.451   1.038  1.00  5.00           C
ATOM     43  CA  THR    43       3.226  -3.953  -0.862  1.00  5.00           C
ATOM     44  CA  ALA    44       5.380  -1.154   0.581  1.00  5.00           C
ATOM     45  CA  ILE    45       4.700  -2.676   4.012  1.00  5.00           C
ATOM     46  CA  GLY    46       0.992  -2.442   3.148  1.00  5.00           C
ATOM     47  CA  MET    47       0.212  -2.939   6.850  1.00  5.00           C
ATOM     48  CA  LEU    48       2.741  -0.180   7.588  1.00  5.00           C
ATOM     49  CA  ALA    49       0.764   2.018   5.176  1.00  5.00           C
ATOM     50  CA  GLU    50      -2.284   1.302   7.355  1.00  5.00           C
ATOM     51  CA  ARG    51      -0.249   2.720  10.254  1.00  5.00           C
ATOM     52  CA  PHE    52       2.419   4.930  11.852  1.00  5.00           C
ATOM     53  CA  VAL    53       3.878   1.829  13.529  1.00  5.00           C
ATOM     54  CA  THR    54       0.324   0.983  14.630  1.00  5.00           C
ATOM     55  CA  ALA    55       0.430  -1.825  17.210  1.00  5.00           C
ATOM     56  CA  ASP    56       4.173  -1.898  16.474  1.00  5.00           C
ATOM     57  CA  SER    57       4.362  -5.377  18.027  1.00  5.00           C
ATOM     58  CA  ASN    58       1.386  -6.429  15.884  1.00  5.00           C
ATOM     59  CA  VAL    59       3.256  -5.141  12.819  1.00  5.00           C
ATOM     60  CA  TYR    60       6.203  -7.305  13.907  1.00  5.00           C
ATOM     61  CA  ASP    61       3.806 -10.273  13.939  1.00  5.00           C
ATOM     62  CA  LEU    62       2.863  -9.280  10.379  1.00  5.00           C
ATOM     63  CA  GLY    63      -0.220 -11.468  10.891  1.00  5.00           C
ATOM     64  CA  CYS    64       2.189 -14.294  11.766  1.00  5.00           C
ATOM     65  CA  SER    65       3.911 -13.490   8.458  1.00  5.00           C
ATOM     66  CA  ARG    66       0.466 -13.925   6.879  1.00  5.00           C
ATOM     67  CA  GLY    67       0.558 -17.441   8.357  1.00  5.00           C
ATOM     68  CA  ALA    68       3.774 -18.036   6.393  1.00  5.00           C
ATOM     69  CA  ALA    69       1.848 -16.900   3.302  1.00  5.00           C
ATOM     70  CA  THR    70       5.127 -15.392   2.066  1.00  5.00           C
ATOM     71  CA  LEU    71       4.613 -13.411  -1.154  1.00  5.00           C
ATOM     72  CA  SER    72       1.278 -15.244  -1.414  1.00  5.00           C
ATOM     73  CA  ALA    73      -0.423 -11.887  -0.790  1.00  5.00           C
ATOM     74  CA  ARG    74      -3.398 -13.338  -2.687  1.00  5.00           C
ATOM     75  CA  ARG    75      -0.912 -13.960  -5.512  1.00  5.00           C
ATOM     76  CA  ASN    76      -0.194 -10.222  -5.254  1.00  5.00           C
ATOM     77  CA  ILE    77      -3.937  -9.824  -5.870  1.00  5.00           C
ATOM     78  CA  ASN    78      -3.269 -11.769  -9.083  1.00  5.00           C
ATOM     79  CA  GLN    79      -0.543  -9.201  -9.808  1.00  5.00           C
ATOM     80  CA  PRO    80      -2.838  -7.889 -12.558  1.00  5.00           C
ATOM     81  CA  ASN    81      -5.583 -10.431 -13.303  1.00  5.00           C
ATOM     82  CA  VAL    82      -8.023  -7.991 -11.678  1.00  5.00           C
ATOM     83  CA  LYS    83     -11.230  -7.434 -13.668  1.00  5.00           C
ATOM     84  CA  ILE    84     -13.268  -9.306 -11.042  1.00  5.00           C
ATOM     85  CA  ILE    85     -10.627 -12.027 -10.742  1.00  5.00           C
ATOM     86  CA  GLY    86      -9.638 -13.463 -14.136  1.00  5.00           C
ATOM     87  CA  ILE    87     -12.690 -11.643 -15.523  1.00  5.00           C
ATOM     88  CA  ASP    88     -10.573 -11.107 -18.651  1.00  5.00           C
ATOM     89  CA  ASN    89      -9.999 -14.879 -18.636  1.00  5.00           C
ATOM     90  CA  SER    90     -13.789 -15.309 -18.636  1.00  5.00           C
ATOM     91  CA  GLN    91     -17.513 -14.775 -19.271  1.00  5.00           C
ATOM     92  CA  PRO    92     -17.662 -18.415 -20.403  1.00  5.00           C
ATOM     93  CA  MET    93     -19.534 -20.413 -17.746  1.00  5.00           C
ATOM     94  CA  VAL    94     -19.180 -17.311 -15.553  1.00  5.00           C
ATOM     95  CA  GLU    95     -16.609 -19.283 -13.539  1.00  5.00           C
ATOM     96  CA  ARG    96     -19.271 -22.006 -13.303  1.00  5.00           C
ATOM     97  CA  CYS    97     -21.386 -19.347 -11.567  1.00  5.00           C
ATOM     98  CA  ARG    98     -19.210 -16.823  -9.711  1.00  5.00           C
ATOM     99  CA  GLN    99     -19.864 -18.814  -6.523  1.00  5.00           C
ATOM    100  CA  HIS   100     -16.166 -19.750  -6.551  1.00  5.00           C
ATOM    101  CA  ILE   101     -15.429 -16.026  -6.938  1.00  5.00           C
ATOM    102  CA  ALA   102     -17.583 -15.534  -3.827  1.00  5.00           C
ATOM    103  CA  ALA   103     -17.021 -11.798  -4.355  1.00  5.00           C
ATOM    104  CA  TYR   104     -13.303 -12.642  -4.495  1.00  5.00           C
ATOM    105  CA  HIS   105     -13.727 -14.160  -1.021  1.00  5.00           C
ATOM    106  CA  SER   106     -15.489 -10.942   0.023  1.00  5.00           C
ATOM    107  CA  GLU   107     -13.111 -10.594   2.986  1.00  5.00           C
ATOM    108  CA  ILE   108     -10.130 -11.466   0.769  1.00  5.00           C
ATOM    109  CA  PRO   109      -8.247  -8.401   2.088  1.00  5.00           C
ATOM    110  CA  VAL   110     -11.344  -6.308   1.323  1.00  5.00           C
ATOM    111  CA  GLU   111      -9.198  -3.222   1.979  1.00  5.00           C
ATOM    112  CA  ILE   112      -6.883  -4.619  -0.712  1.00  5.00           C
ATOM    113  CA  LEU   113      -9.894  -4.398  -3.044  1.00  5.00           C
ATOM    114  CA  CYS   114     -10.209  -0.763  -1.930  1.00  5.00           C
ATOM    115  CA  ASN   115      -6.532  -0.375  -2.871  1.00  5.00           C
ATOM    116  CA  ASP   116      -7.455  -1.574  -6.374  1.00  5.00           C
ATOM    117  CA  ILE   117     -10.251   1.021  -6.286  1.00  5.00           C
ATOM    118  CA  ARG   118     -11.332  -0.477  -9.624  1.00  5.00           C
ATOM    119  CA  HIS   119      -7.747   0.225 -10.723  1.00  5.00           C
ATOM    120  CA  VAL   120      -8.473   3.822  -9.682  1.00  5.00           C
ATOM    121  CA  GLU   121     -11.432   3.605 -12.080  1.00  5.00           C
ATOM    122  CA  ILE   122     -10.784   7.268 -12.937  1.00  5.00           C
ATOM    123  CA  LYS   123      -7.114   6.383 -13.489  1.00  5.00           C
ATOM    124  CA  ASN   124      -7.410   8.108 -16.879  1.00  5.00           C
ATOM    125  CA  ALA   125      -8.765  11.134 -14.991  1.00  5.00           C
ATOM    126  CA  SER   126      -5.484  11.001 -13.049  1.00  5.00           C
ATOM    127  CA  MET   127      -7.461  12.581 -10.195  1.00  5.00           C
ATOM    128  CA  VAL   128     -10.967  13.430 -11.436  1.00  5.00           C
ATOM    129  CA  ILE   129     -10.802  16.292  -8.919  1.00  5.00           C
ATOM    130  CA  LEU   130      -7.762  15.783  -6.670  1.00  5.00           C
ATOM    131  CA  ASN   131      -7.600  18.552  -4.051  1.00  5.00           C
ATOM    132  CA  PHE   132      -9.796  16.434  -1.769  1.00  5.00           C
ATOM    133  CA  THR   133     -11.569  17.441   1.455  1.00  5.00           C
ATOM    134  CA  LEU   134     -12.772  16.384   4.917  1.00  5.00           C
ATOM    135  CA  GLN   135      -9.425  14.670   5.465  1.00  5.00           C
ATOM    136  CA  PHE   136     -11.349  11.557   6.541  1.00  5.00           C
ATOM    137  CA  LEU   137     -13.448  11.934   3.379  1.00  5.00           C
ATOM    138  CA  PRO   138     -16.378  10.394   5.276  1.00  5.00           C
ATOM    139  CA  PRO   139     -19.433  10.145   3.005  1.00  5.00           C
ATOM    140  CA  GLU   140     -19.169  12.653   0.143  1.00  5.00           C
ATOM    141  CA  ASP   141     -19.927  15.429   2.648  1.00  5.00           C
ATOM    142  CA  ARG   142     -18.974  18.035   0.031  1.00  5.00           C
ATOM    143  CA  ILE   143     -15.685  16.165  -0.524  1.00  5.00           C
ATOM    144  CA  ALA   144     -13.979  16.876  -3.867  1.00  5.00           C
ATOM    145  CA  LEU   145     -13.477  13.755  -6.002  1.00  5.00           C
ATOM    146  CA  LEU   146     -13.966  10.987  -8.582  1.00  5.00           C
ATOM    147  CA  THR   147     -17.689  11.153  -7.766  1.00  5.00           C
ATOM    148  CA  LYS   148     -18.072   7.670  -9.319  1.00  5.00           C
ATOM    149  CA  ILE   149     -15.191   6.472  -7.124  1.00  5.00           C
ATOM    150  CA  TYR   150     -16.993   7.971  -4.115  1.00  5.00           C
ATOM    151  CA  GLU   151     -20.129   6.067  -5.162  1.00  5.00           C
ATOM    152  CA  GLY   152     -18.043   2.878  -5.001  1.00  5.00           C
ATOM    153  CA  LEU   153     -16.851   3.792  -1.495  1.00  5.00           C
ATOM    154  CA  ASN   154     -20.487   4.539  -0.614  1.00  5.00           C
ATOM    155  CA  PRO   155     -19.135   5.293   2.873  1.00  5.00           C
ATOM    156  CA  ASN   156     -16.003   3.143   3.222  1.00  5.00           C
ATOM    157  CA  GLY   157     -14.615   5.914   5.447  1.00  5.00           C
ATOM    158  CA  VAL   158     -10.952   6.784   4.829  1.00  5.00           C
ATOM    159  CA  LEU   159     -11.245   4.107   2.127  1.00  5.00           C
ATOM    160  CA  VAL   160      -7.433   4.014   2.253  1.00  5.00           C
ATOM    161  CA  LEU   161      -7.553   7.767   1.578  1.00  5.00           C
ATOM    162  CA  SER   162      -3.910   7.493   0.477  1.00  5.00           C
ATOM    163  CA  GLU   163      -1.124   4.888   0.483  1.00  5.00           C
ATOM    164  CA  LYS   164      -2.672   3.572   3.712  1.00  5.00           C
ATOM    165  CA  PHE   165      -2.356   7.139   5.028  1.00  5.00           C
ATOM    166  CA  ARG   166      -1.238  10.064   7.205  1.00  5.00           C
ATOM    167  CA  PHE   167       2.374   9.984   8.432  1.00  5.00           C
ATOM    168  CA  GLU   168       1.114   8.946  11.897  1.00  5.00           C
ATOM    169  CA  ASP   169       0.827  12.667  12.692  1.00  5.00           C
ATOM    170  CA  THR   170       4.446  12.935  11.515  1.00  5.00           C
ATOM    171  CA  LYS   171       5.319  10.556  14.368  1.00  5.00           C
ATOM    172  CA  ILE   172       3.513  13.008  16.666  1.00  5.00           C
ATOM    173  CA  ASN   173       4.607  10.787  19.569  1.00  5.00           C
ATOM    174  CA  HIS   174       8.166  10.928  18.203  1.00  5.00           C
ATOM    175  CA  LEU   175       7.810  14.726  18.239  1.00  5.00           C
ATOM    176  CA  LEU   176       6.932  14.360  21.934  1.00  5.00           C
ATOM    177  CA  ILE   177      10.190  12.418  22.342  1.00  5.00           C
ATOM    178  CA  ASP   178      12.002  15.355  20.717  1.00  5.00           C
ATOM    179  CA  LEU   179      15.246  13.382  21.085  1.00  5.00           C
ATOM    180  CA  HIS   180      16.492  15.111  17.921  1.00  5.00           C
ATOM    181  CA  HIS   181      15.609  18.458  19.524  1.00  5.00           C
ATOM    182  CA  GLN   182      16.791  20.178  16.331  1.00  5.00           C
ATOM    183  CA  PHE   183      14.739  17.640  14.354  1.00  5.00           C
ATOM    184  CA  LYS   184      14.286  20.219  11.588  1.00  5.00           C
ATOM    185  CA  ARG   185      13.256  22.741  14.259  1.00  5.00           C
ATOM    186  CA  ALA   186      12.316  25.146  11.447  1.00  5.00           C
ATOM    187  CA  ASN   187       9.219  26.226  13.395  1.00  5.00           C
ATOM    188  CA  GLY   188       8.401  22.575  14.141  1.00  5.00           C
ATOM    189  CA  TYR   189       4.914  23.697  15.207  1.00  5.00           C
ATOM    190  CA  SER   190       4.722  25.516  11.859  1.00  5.00           C
ATOM    191  CA  GLU   191       5.439  22.113  10.290  1.00  5.00           C
ATOM    192  CA  LEU   192       2.398  20.939  12.272  1.00  5.00           C
ATOM    193  CA  GLU   193       0.508  23.705  10.447  1.00  5.00           C
ATOM    194  CA  VAL   194       1.595  21.957   7.235  1.00  5.00           C
ATOM    195  CA  SER   195       0.107  18.768   8.708  1.00  5.00           C
ATOM    196  CA  GLN   196       2.263  16.830   6.228  1.00  5.00           C
ATOM    197  CA  LYS   197       0.627  18.868   3.448  1.00  5.00           C
ATOM    198  CA  ARG   198      -2.751  17.873   4.914  1.00  5.00           C
ATOM    199  CA  THR   199      -1.552  14.253   4.807  1.00  5.00           C
ATOM    200  CA  ALA   200      -0.484  12.508   1.587  1.00  5.00           C
ATOM    201  CA  LEU   201      -3.345  14.384  -0.099  1.00  5.00           C
ATOM    202  CA  GLU   202      -2.499  18.103  -0.010  1.00  5.00           C
ATOM    203  CA  ASN   203      -2.897  18.171  -3.803  1.00  5.00           C
ATOM    204  CA  VAL   204      -0.840  14.976  -4.137  1.00  5.00           C
ATOM    205  CA  MET   205       0.866  11.575  -4.427  1.00  5.00           C
ATOM    206  CA  ARG   206       2.930  10.747  -1.328  1.00  5.00           C
ATOM    207  CA  THR   207       2.357   7.079  -2.206  1.00  5.00           C
ATOM    208  CA  ASP   208       6.130   6.614  -1.874  1.00  5.00           C
ATOM    209  CA  SER   209       5.835   8.203   1.581  1.00  5.00           C
ATOM    210  CA  ILE   210       9.596   8.870   1.456  1.00  5.00           C
ATOM    211  CA  GLU   211      10.079   5.226   0.435  1.00  5.00           C
ATOM    212  CA  THR   212       8.072   4.399   3.572  1.00  5.00           C
ATOM    213  CA  HIS   213      10.769   6.328   5.458  1.00  5.00           C
ATOM    214  CA  LYS   214      13.297   4.039   3.748  1.00  5.00           C
ATOM    215  CA  VAL   215      11.266   1.162   5.214  1.00  5.00           C
ATOM    216  CA  ARG   216      11.611   2.921   8.582  1.00  5.00           C
ATOM    217  CA  LEU   217      12.430  -0.500  10.057  1.00  5.00           C
ATOM    218  CA  LYS   218      15.156  -0.664   7.393  1.00  5.00           C
ATOM    219  CA  ASN   219      17.369  -2.178  10.106  1.00  5.00           C
ATOM    220  CA  VAL   220      14.626  -4.745  10.772  1.00  5.00           C
ATOM    221  CA  GLY   221      15.550  -8.345   9.914  1.00  5.00           C
ATOM    222  CA  PHE   222      13.598 -11.615  10.154  1.00  5.00           C
ATOM    223  CA  SER   223      15.948 -12.696  12.959  1.00  5.00           C
ATOM    224  CA  GLN   224      15.217 -16.293  11.919  1.00  5.00           C
ATOM    225  CA  VAL   225      16.276 -15.214   8.416  1.00  5.00           C
ATOM    226  CA  GLU   226      19.556 -14.176  10.064  1.00  5.00           C
ATOM    227  CA  LEU   227      19.679 -17.764  11.353  1.00  5.00           C
ATOM    228  CA  TRP   228      19.517 -18.820   7.691  1.00  5.00           C
ATOM    229  CA  PHE   229      22.578 -16.623   7.079  1.00  5.00           C
ATOM    230  CA  GLN   230      21.871 -16.585   3.330  1.00  5.00           C
ATOM    231  CA  CYS   231      21.008 -20.301   3.361  1.00  5.00           C
ATOM    232  CA  PHE   232      21.908 -20.534  -0.339  1.00  5.00           C
ATOM    233  CA  ASN   233      19.872 -17.361  -0.921  1.00  5.00           C
ATOM    234  CA  PHE   234      20.720 -17.653  -4.629  1.00  5.00           C
ATOM    235  CA  GLY   235      17.391 -19.446  -5.138  1.00  5.00           C
ATOM    236  CA  SER   236      14.940 -21.239  -2.829  1.00  5.00           C
ATOM    237  CA  MET   237      15.085 -18.185  -0.546  1.00  5.00           C
ATOM    238  CA  ILE   238      11.423 -17.639  -1.467  1.00  5.00           C
ATOM    239  CA  ALA   239      10.916 -21.268  -0.406  1.00  5.00           C
ATOM    240  CA  VAL   240      12.515 -20.225   2.897  1.00  5.00           C
ATOM    241  CA  LYS   241       9.886 -17.464   3.045  1.00  5.00           C
TER
END


