
PFRMAT TS
TARGET T0092
AUTHOR 5477-6509-1337
MODEL 4 UNREFINED
REMARK
REMARK   Work performed by Kai-Ming Ho, James R. Morris, Cai-Zhuang Wang,
REMARK                   Drena Dobbs, Tzu-Liang Chan, Young-Ok Im,
REMARK                   Josh Koch, Neil Voss
REMARK
REMARK   Acknowledgments to Amy Andreotti and Josh Lapan
REMARK
REMARK   Work supported by Pioneer Hi-Bred, by a Carver Foundation grant
REMARK     from Iowa State University, and a Laboratory Directed 
REMARK     Research and Development grant from Ames Laboratory, U.S.D.O.E.
REMARK
REMARK
METHOD   This structure was obtained originally using our model 2 unrefined
METHOD   prediction.  Subsequently, the entire structure was annealed, with
METHOD   hydrogen bonding assignments made according to the secondary structure
METHOD   prediction given by PHD, to bias the system towards the predicted
METHOD   secondary structure.  The annealing was performed using our coarse
METHOD   grained molecular dynamics model (two beads, one for the backbone and
METHOD   one for the side chain).
METHOD
METHOD   All atom models were generated using the MaxSprout Server (L. Holm,
METHOD   C. Sander (1991) J. Mol. Biol. 218:183-194), using the CA positions
METHOD   from the coarse grained model.  The resulting backbone is broken
METHOD   in a number of places, where the original CA only model was fully
METHOD   connected.  The "unrefined" model contains the original CA trace.
REMARK
REMARK
PARENT N/A
ATOM      1  CA  MET     1     -11.056  -1.155   2.599  1.00  5.00           C
ATOM      2  CA  VAL     2     -10.504   2.619   2.510  1.00  5.00           C
ATOM      3  CA  LYS     3     -13.625   4.563   3.528  1.00  5.00           C
ATOM      4  CA  ASP     4     -13.770   5.838  -0.064  1.00  5.00           C
ATOM      5  CA  THR     5     -15.346   9.024   1.321  1.00  5.00           C
ATOM      6  CA  LEU     6     -12.344   9.120   3.673  1.00  5.00           C
ATOM      7  CA  PHE     7     -10.242   9.033   0.490  1.00  5.00           C
ATOM      8  CA  SER     8     -12.048  12.200  -0.673  1.00  5.00           C
ATOM      9  CA  THR     9     -11.617  13.726   2.797  1.00  5.00           C
ATOM     10  CA  PRO    10      -9.437  16.479   1.305  1.00  5.00           C
ATOM     11  CA  ILE    11      -6.647  13.909   0.893  1.00  5.00           C
ATOM     12  CA  ALA    12      -4.227  16.593   2.116  1.00  5.00           C
ATOM     13  CA  LYS    13      -6.535  16.929   5.135  1.00  5.00           C
ATOM     14  CA  LEU    14      -5.904  13.193   5.579  1.00  5.00           C
ATOM     15  CA  GLY    15      -2.218  14.174   5.671  1.00  5.00           C
ATOM     16  CA  ASP    16      -3.115  16.407   8.632  1.00  5.00           C
ATOM     17  CA  PHE    17      -4.702  13.280  10.136  1.00  5.00           C
ATOM     18  CA  ILE    18      -1.318  11.582   9.671  1.00  5.00           C
ATOM     19  CA  PHE    19       0.222  14.618  11.394  1.00  5.00           C
ATOM     20  CA  ASP    20       3.547  13.580   9.836  1.00  5.00           C
ATOM     21  CA  GLU    21       3.021  10.172  11.468  1.00  5.00           C
ATOM     22  CA  ASN    22       2.743  12.032  14.787  1.00  5.00           C
ATOM     23  CA  VAL    23       5.946  13.914  13.918  1.00  5.00           C
ATOM     24  CA  ALA    24       6.305  14.726  17.628  1.00  5.00           C
ATOM     25  CA  GLU    25       9.604  12.818  17.452  1.00  5.00           C
ATOM     26  CA  VAL    26      10.529  15.327  14.732  1.00  5.00           C
ATOM     27  CA  PHE    27       9.049  18.774  15.428  1.00  5.00           C
ATOM     28  CA  PRO    28      12.496  20.211  14.648  1.00  5.00           C
ATOM     29  CA  ASP    29      10.709  23.062  12.850  1.00  5.00           C
ATOM     30  CA  MET    30       8.910  20.365  10.840  1.00  5.00           C
ATOM     31  CA  ILE    31      12.393  19.066   9.986  1.00  5.00           C
ATOM     32  CA  GLN    32      12.835  22.371   8.134  1.00  5.00           C
ATOM     33  CA  ARG    33       9.605  21.548   6.271  1.00  5.00           C
ATOM     34  CA  SER    34      11.412  21.999   2.941  1.00  5.00           C
ATOM     35  CA  VAL    35      14.384  19.986   4.234  1.00  5.00           C
ATOM     36  CA  PRO    36      13.287  17.139   1.943  1.00  5.00           C
ATOM     37  CA  GLY    37       9.937  18.086   0.382  1.00  5.00           C
ATOM     38  CA  TYR    38      11.552  17.710  -3.054  1.00  5.00           C
ATOM     39  CA  SER    39       8.234  18.868  -4.538  1.00  5.00           C
ATOM     40  CA  ASN    40       6.632  16.135  -2.413  1.00  5.00           C
ATOM     41  CA  ILE    41       9.063  13.725  -4.098  1.00  5.00           C
ATOM     42  CA  ILE    42       7.666  15.069  -7.384  1.00  5.00           C
ATOM     43  CA  THR    43       4.251  13.790  -6.238  1.00  5.00           C
ATOM     44  CA  ALA    44       5.839  10.394  -5.527  1.00  5.00           C
ATOM     45  CA  ILE    45       7.286  10.466  -9.056  1.00  5.00           C
ATOM     46  CA  GLY    46       6.318   6.787  -9.350  1.00  5.00           C
ATOM     47  CA  MET    47       9.342   6.253 -11.614  1.00  5.00           C
ATOM     48  CA  LEU    48      11.406   7.980  -8.910  1.00  5.00           C
ATOM     49  CA  ALA    49      10.235   5.146  -6.640  1.00  5.00           C
ATOM     50  CA  GLU    50      11.745   2.776  -9.192  1.00  5.00           C
ATOM     51  CA  ARG    51      13.789   1.056  -6.469  1.00  5.00           C
ATOM     52  CA  PHE    52      14.607   4.358  -4.743  1.00  5.00           C
ATOM     53  CA  VAL    53      17.105   5.366  -7.445  1.00  5.00           C
ATOM     54  CA  THR    54      18.580   1.847  -7.479  1.00  5.00           C
ATOM     55  CA  ALA    55      18.327   1.783 -11.294  1.00  5.00           C
ATOM     56  CA  ASP    56      19.904   5.257 -11.359  1.00  5.00           C
ATOM     57  CA  SER    57      21.342   4.365 -14.779  1.00  5.00           C
ATOM     58  CA  ASN    58      17.790   3.339 -15.718  1.00  5.00           C
ATOM     59  CA  VAL    59      16.855   6.998 -15.182  1.00  5.00           C
ATOM     60  CA  TYR    60      19.416   7.743 -17.909  1.00  5.00           C
ATOM     61  CA  ASP    61      17.267   5.636 -20.254  1.00  5.00           C
ATOM     62  CA  LEU    62      14.327   7.746 -19.048  1.00  5.00           C
ATOM     63  CA  GLY    63      12.296   4.525 -19.279  1.00  5.00           C
ATOM     64  CA  CYS    64      13.167   4.399 -22.992  1.00  5.00           C
ATOM     65  CA  SER    65      11.805   7.955 -23.232  1.00  5.00           C
ATOM     66  CA  ARG    66       9.972   6.845 -26.388  1.00  5.00           C
ATOM     67  CA  GLY    67       7.637   9.805 -25.807  1.00  5.00           C
ATOM     68  CA  ALA    68       6.741   8.314 -22.412  1.00  5.00           C
ATOM     69  CA  ALA    69       5.453   5.260 -24.300  1.00  5.00           C
ATOM     70  CA  THR    70       2.404   5.465 -22.016  1.00  5.00           C
ATOM     71  CA  LEU    71       4.887   5.283 -19.126  1.00  5.00           C
ATOM     72  CA  SER    72       6.024   2.023 -20.747  1.00  5.00           C
ATOM     73  CA  ALA    73       2.375   0.959 -20.416  1.00  5.00           C
ATOM     74  CA  ARG    74       2.887   1.539 -16.680  1.00  5.00           C
ATOM     75  CA  ARG    75       5.817  -0.875 -17.052  1.00  5.00           C
ATOM     76  CA  ASN    76       3.243  -3.254 -18.559  1.00  5.00           C
ATOM     77  CA  ILE    77       1.416  -2.926 -15.226  1.00  5.00           C
ATOM     78  CA  ASN    78       4.663  -4.209 -13.689  1.00  5.00           C
ATOM     79  CA  GLN    79       4.281  -7.165 -16.070  1.00  5.00           C
ATOM     80  CA  PRO    80       6.056  -9.187 -13.365  1.00  5.00           C
ATOM     81  CA  ASN    81       5.529  -7.387 -10.042  1.00  5.00           C
ATOM     82  CA  VAL    82       1.965  -8.730 -10.260  1.00  5.00           C
ATOM     83  CA  LYS    83       1.172  -9.842 -13.822  1.00  5.00           C
ATOM     84  CA  ILE    84      -2.497  -9.000 -13.095  1.00  5.00           C
ATOM     85  CA  ILE    85      -2.179 -11.002  -9.864  1.00  5.00           C
ATOM     86  CA  GLY    86      -3.577 -14.561 -10.142  1.00  5.00           C
ATOM     87  CA  ILE    87      -4.560 -14.440  -6.458  1.00  5.00           C
ATOM     88  CA  ASP    88      -8.050 -15.496  -7.580  1.00  5.00           C
ATOM     89  CA  ASN    89      -6.299 -18.328  -9.443  1.00  5.00           C
ATOM     90  CA  SER    90      -4.611 -19.181  -6.130  1.00  5.00           C
ATOM     91  CA  GLN    91      -6.641 -21.212  -3.618  1.00  5.00           C
ATOM     92  CA  PRO    92      -4.699 -19.462  -0.839  1.00  5.00           C
ATOM     93  CA  MET    93      -1.409 -21.271  -0.163  1.00  5.00           C
ATOM     94  CA  VAL    94      -0.633 -18.564   2.411  1.00  5.00           C
ATOM     95  CA  GLU    95      -1.494 -15.954  -0.235  1.00  5.00           C
ATOM     96  CA  ARG    96       0.986 -17.807  -2.464  1.00  5.00           C
ATOM     97  CA  CYS    97       3.625 -16.459  -0.062  1.00  5.00           C
ATOM     98  CA  ARG    98       2.404 -13.214   1.531  1.00  5.00           C
ATOM     99  CA  GLN    99       5.754 -11.715   0.489  1.00  5.00           C
ATOM    100  CA  HIS   100       4.939 -12.802  -3.076  1.00  5.00           C
ATOM    101  CA  ILE   101       1.842 -10.591  -2.793  1.00  5.00           C
ATOM    102  CA  ALA   102       4.242  -7.767  -1.888  1.00  5.00           C
ATOM    103  CA  ALA   103       1.552  -6.484   0.492  1.00  5.00           C
ATOM    104  CA  TYR   104      -0.825  -6.547  -2.491  1.00  5.00           C
ATOM    105  CA  HIS   105       1.640  -4.297  -4.339  1.00  5.00           C
ATOM    106  CA  SER   106       1.856  -2.092  -1.227  1.00  5.00           C
ATOM    107  CA  GLU   107       1.203   0.965  -3.421  1.00  5.00           C
ATOM    108  CA  ILE   108      -2.032  -0.649  -4.612  1.00  5.00           C
ATOM    109  CA  PRO   109      -1.724   1.281  -7.889  1.00  5.00           C
ATOM    110  CA  VAL   110      -2.867  -1.831  -9.777  1.00  5.00           C
ATOM    111  CA  GLU   111      -4.878   0.467 -12.064  1.00  5.00           C
ATOM    112  CA  ILE   112      -6.514  -2.630 -13.569  1.00  5.00           C
ATOM    113  CA  LEU   113      -7.215  -3.849 -10.023  1.00  5.00           C
ATOM    114  CA  CYS   114      -8.827  -0.442  -9.434  1.00  5.00           C
ATOM    115  CA  ASN   115     -11.186  -1.345 -12.293  1.00  5.00           C
ATOM    116  CA  ASP   116     -11.878  -4.586 -10.402  1.00  5.00           C
ATOM    117  CA  ILE   117     -12.556  -2.343  -7.391  1.00  5.00           C
ATOM    118  CA  ARG   118     -15.586  -1.042  -9.310  1.00  5.00           C
ATOM    119  CA  HIS   119     -15.730   1.908  -6.895  1.00  5.00           C
ATOM    120  CA  VAL   120     -15.357  -0.503  -3.966  1.00  5.00           C
ATOM    121  CA  GLU   121     -18.367  -2.399  -5.345  1.00  5.00           C
ATOM    122  CA  ILE   122     -18.433  -4.165  -1.965  1.00  5.00           C
ATOM    123  CA  LYS   123     -18.490  -0.642  -0.503  1.00  5.00           C
ATOM    124  CA  ASN   124     -21.893  -0.396  -2.209  1.00  5.00           C
ATOM    125  CA  ALA   125     -22.941  -3.394  -0.095  1.00  5.00           C
ATOM    126  CA  SER   126     -21.583  -1.477   2.911  1.00  5.00           C
ATOM    127  CA  MET   127     -20.106  -4.788   4.097  1.00  5.00           C
ATOM    128  CA  VAL   128     -23.669  -6.146   3.976  1.00  5.00           C
ATOM    129  CA  ILE   129     -23.992  -4.645   7.468  1.00  5.00           C
ATOM    130  CA  LEU   130     -20.474  -4.235   8.887  1.00  5.00           C
ATOM    131  CA  ASN   131     -21.362  -0.608   9.661  1.00  5.00           C
ATOM    132  CA  PHE   132     -17.651   0.270   9.561  1.00  5.00           C
ATOM    133  CA  THR   133     -16.996  -2.645  11.934  1.00  5.00           C
ATOM    134  CA  LEU   134     -13.960  -3.511   9.792  1.00  5.00           C
ATOM    135  CA  GLN   135     -11.856  -3.150  12.955  1.00  5.00           C
ATOM    136  CA  PHE   136     -14.195  -5.643  14.669  1.00  5.00           C
ATOM    137  CA  LEU   137     -13.722  -8.025  11.726  1.00  5.00           C
ATOM    138  CA  PRO   138     -12.289 -10.573  14.177  1.00  5.00           C
ATOM    139  CA  PRO   139     -14.913 -12.848  15.755  1.00  5.00           C
ATOM    140  CA  GLU   140     -18.175 -11.088  16.662  1.00  5.00           C
ATOM    141  CA  ASP   141     -20.055 -14.342  16.007  1.00  5.00           C
ATOM    142  CA  ARG   142     -22.808 -12.123  14.574  1.00  5.00           C
ATOM    143  CA  ILE   143     -20.047 -10.893  12.246  1.00  5.00           C
ATOM    144  CA  ALA   144     -19.729 -14.585  11.337  1.00  5.00           C
ATOM    145  CA  LEU   145     -22.388 -13.726   8.739  1.00  5.00           C
ATOM    146  CA  LEU   146     -19.854 -11.133   7.554  1.00  5.00           C
ATOM    147  CA  THR   147     -17.512 -14.102   7.046  1.00  5.00           C
ATOM    148  CA  LYS   148     -20.215 -15.552   4.779  1.00  5.00           C
ATOM    149  CA  ILE   149     -20.098 -12.193   2.975  1.00  5.00           C
ATOM    150  CA  TYR   150     -16.353 -12.854   2.670  1.00  5.00           C
ATOM    151  CA  GLU   151     -17.364 -16.089   0.917  1.00  5.00           C
ATOM    152  CA  GLY   152     -19.409 -13.874  -1.421  1.00  5.00           C
ATOM    153  CA  LEU   153     -16.262 -11.842  -2.143  1.00  5.00           C
ATOM    154  CA  ASN   154     -14.431 -15.134  -2.789  1.00  5.00           C
ATOM    155  CA  PRO   155     -14.203 -14.217  -6.485  1.00  5.00           C
ATOM    156  CA  ASN   156     -11.170 -11.954  -6.969  1.00  5.00           C
ATOM    157  CA  GLY   157     -12.166 -10.330  -3.664  1.00  5.00           C
ATOM    158  CA  VAL   158      -8.513  -9.938  -2.692  1.00  5.00           C
ATOM    159  CA  LEU   159      -8.852  -6.156  -3.005  1.00  5.00           C
ATOM    160  CA  VAL   160     -12.133  -6.380  -1.073  1.00  5.00           C
ATOM    161  CA  LEU   161     -10.166  -8.066   1.728  1.00  5.00           C
ATOM    162  CA  SER   162      -7.993  -4.931   1.681  1.00  5.00           C
ATOM    163  CA  GLU   163      -5.264  -5.369   4.311  1.00  5.00           C
ATOM    164  CA  LYS   164      -6.970  -8.701   5.045  1.00  5.00           C
ATOM    165  CA  PHE   165      -8.265  -7.025   8.219  1.00  5.00           C
ATOM    166  CA  ARG   166      -9.582  -9.638  10.667  1.00  5.00           C
ATOM    167  CA  PHE   167      -9.621 -11.921   7.610  1.00  5.00           C
ATOM    168  CA  GLU   168     -10.020 -14.829  10.048  1.00  5.00           C
ATOM    169  CA  ASP   169      -6.890 -13.497  11.775  1.00  5.00           C
ATOM    170  CA  THR   170      -5.119 -13.804   8.410  1.00  5.00           C
ATOM    171  CA  LYS   171      -6.074 -17.497   8.466  1.00  5.00           C
ATOM    172  CA  ILE   172      -4.425 -17.646  11.903  1.00  5.00           C
ATOM    173  CA  ASN   173      -4.942 -21.423  11.757  1.00  5.00           C
ATOM    174  CA  HIS   174      -3.230 -21.294   8.350  1.00  5.00           C
ATOM    175  CA  LEU   175      -0.377 -19.609  10.240  1.00  5.00           C
ATOM    176  CA  LEU   176      -0.506 -22.747  12.406  1.00  5.00           C
ATOM    177  CA  ILE   177       0.357 -24.543   9.153  1.00  5.00           C
ATOM    178  CA  ASP   178       3.407 -22.252   9.101  1.00  5.00           C
ATOM    179  CA  LEU   179       4.311 -23.726   5.716  1.00  5.00           C
ATOM    180  CA  HIS   180       7.460 -21.549   5.664  1.00  5.00           C
ATOM    181  CA  HIS   181       8.190 -22.448   9.299  1.00  5.00           C
ATOM    182  CA  GLN   182      10.419 -19.379   9.712  1.00  5.00           C
ATOM    183  CA  PHE   183       7.837 -17.252   7.839  1.00  5.00           C
ATOM    184  CA  LYS   184       8.642 -14.343  10.172  1.00  5.00           C
ATOM    185  CA  ARG   185       8.216 -16.772  13.083  1.00  5.00           C
ATOM    186  CA  ALA   186      10.075 -14.248  15.257  1.00  5.00           C
ATOM    187  CA  ASN   187       7.290 -14.537  17.825  1.00  5.00           C
ATOM    188  CA  GLY   188       4.700 -14.179  15.047  1.00  5.00           C
ATOM    189  CA  TYR   189       1.981 -13.696  17.679  1.00  5.00           C
ATOM    190  CA  SER   190       4.203 -11.005  19.219  1.00  5.00           C
ATOM    191  CA  GLU   191       4.175  -9.411  15.753  1.00  5.00           C
ATOM    192  CA  LEU   192       0.370  -9.457  16.021  1.00  5.00           C
ATOM    193  CA  GLU   193       0.788  -7.619  19.338  1.00  5.00           C
ATOM    194  CA  VAL   194       2.861  -5.059  17.415  1.00  5.00           C
ATOM    195  CA  SER   195      -0.095  -4.696  15.031  1.00  5.00           C
ATOM    196  CA  GLN   196       1.826  -1.765  13.523  1.00  5.00           C
ATOM    197  CA  LYS   197       2.047  -0.425  17.088  1.00  5.00           C
ATOM    198  CA  ARG   198      -1.761  -0.646  17.171  1.00  5.00           C
ATOM    199  CA  THR   199      -1.721   1.450  13.984  1.00  5.00           C
ATOM    200  CA  ALA   200      -2.845   5.093  14.123  1.00  5.00           C
ATOM    201  CA  LEU   201      -3.795   4.601  10.462  1.00  5.00           C
ATOM    202  CA  GLU   202      -3.700   0.862   9.710  1.00  5.00           C
ATOM    203  CA  ASN   203      -7.521   0.997   9.572  1.00  5.00           C
ATOM    204  CA  VAL   204      -7.309   4.030   7.242  1.00  5.00           C
ATOM    205  CA  MET   205      -5.900   3.368   3.759  1.00  5.00           C
ATOM    206  CA  ARG   206      -2.776   1.289   3.075  1.00  5.00           C
ATOM    207  CA  THR   207      -2.868   2.373  -0.582  1.00  5.00           C
ATOM    208  CA  ASP   208      -1.185   5.689   0.264  1.00  5.00           C
ATOM    209  CA  SER   209       1.129   3.888   2.710  1.00  5.00           C
ATOM    210  CA  ILE   210       0.999   7.004   4.906  1.00  5.00           C
ATOM    211  CA  GLU   211       2.182   8.926   1.831  1.00  5.00           C
ATOM    212  CA  THR   212       5.056   6.419   1.738  1.00  5.00           C
ATOM    213  CA  HIS   213       5.657   7.396   5.376  1.00  5.00           C
ATOM    214  CA  LYS   214       5.986  10.979   4.110  1.00  5.00           C
ATOM    215  CA  VAL   215       8.815   9.689   1.899  1.00  5.00           C
ATOM    216  CA  ARG   216      10.412   8.283   5.066  1.00  5.00           C
ATOM    217  CA  LEU   217       9.947  11.738   6.615  1.00  5.00           C
ATOM    218  CA  LYS   218      11.530  10.242   9.748  1.00  5.00           C
ATOM    219  CA  ASN   219      14.462   9.327   7.485  1.00  5.00           C
ATOM    220  CA  VAL   220      14.524  12.964   6.337  1.00  5.00           C
ATOM    221  CA  GLY   221      15.969  13.577   2.860  1.00  5.00           C
ATOM    222  CA  PHE   222      17.051  11.220   0.062  1.00  5.00           C
ATOM    223  CA  SER   223      20.468  12.915   0.122  1.00  5.00           C
ATOM    224  CA  GLN   224      21.431  10.643  -2.786  1.00  5.00           C
ATOM    225  CA  VAL   225      18.156  11.684  -4.443  1.00  5.00           C
ATOM    226  CA  GLU   226      19.389  15.273  -4.048  1.00  5.00           C
ATOM    227  CA  LEU   227      22.144  14.296  -6.499  1.00  5.00           C
ATOM    228  CA  TRP   228      19.412  12.905  -8.768  1.00  5.00           C
ATOM    229  CA  PHE   229      21.705  13.640 -11.727  1.00  5.00           C
ATOM    230  CA  GLN   230      21.988  17.234 -10.480  1.00  5.00           C
ATOM    231  CA  CYS   231      18.183  17.436 -10.666  1.00  5.00           C
ATOM    232  CA  PHE   232      18.342  16.002 -14.183  1.00  5.00           C
ATOM    233  CA  ASN   233      16.198  18.855 -15.484  1.00  5.00           C
ATOM    234  CA  PHE   234      13.822  18.397 -12.535  1.00  5.00           C
ATOM    235  CA  GLY   235      11.194  20.203 -14.629  1.00  5.00           C
ATOM    236  CA  SER   236      11.929  17.653 -17.370  1.00  5.00           C
ATOM    237  CA  MET   237      10.975  15.043 -14.757  1.00  5.00           C
ATOM    238  CA  ILE   238       7.727  17.018 -14.431  1.00  5.00           C
ATOM    239  CA  ALA   239       7.407  16.396 -18.182  1.00  5.00           C
ATOM    240  CA  VAL   240       7.662  12.712 -17.225  1.00  5.00           C
ATOM    241  CA  LYS   241       4.638  13.331 -14.982  1.00  5.00           C
TER
END


