
PFRMAT TS
TARGET T0092
AUTHOR 6000-4062-7650
METHOD FORESST method for structure family recognition
METHOD see V. Di Francesco,et al. Bioinformatics,
METHOD vol. 15, 131 - 140, 1999.
METHOD see V. Geetha  Protein Engineering, vol. 12, pp. 527 - 534, 1999.
METHOD Secondary structure prediction from PSI-PRED
METHOD (http://globin.bio.warwick.ac.uk/psipred/  or
METHOD  http://insulin.brunel.ac.uk/psipred/)
METHOD  Top FORESST predicted family with Z-score above 2.0, and
METHOD  model length within 20% of query sequence is chosen
METHOD  Alignment by CLUSTALW to family member with highest amino
METHOD  acid sequence identity is chosen as template.
REMARK A preliminary PSI BLAST search has detected a significant
REMARK homology (E <= 0.01) with the following protein structures:
REMARK pdb|1D2G|1D2G-A glycine n-methyltransferasefragment:
REMARK whole enzy...    51 2e-05
REMARK pdb|1XVA|1XVA-A glycine n-methyltransferase(gnmt,
REMARK s-adenosyl-l-... 51 2e-05
REMARK pdb|1BHJ|1BHJ-A glycine n-methyltransferase(gnmt,
REMARK folate bindin...    51 2e-05
REMARK Folding can be solved by homology modeling
MODEL  1  UNREFINED
PARENT NONE
TER
END



	Jean Garnier

Mathematical and Statistical Computing Laboratory
CIT, Bldg 12A, Room 2007
National Institutes of Health
Bethesda, MD 20892-5626, USA
tel: 301 402 0506
fax: 301 402 4544

