
PFRMAT AL
TARGET T0093
AUTHOR 3092-8926-3558
METHOD PDB BLAST http://bioinformatics.ljcrf.edu/pdb_blast/
METHOD 1) Use PSI-Blast to collect homologs and create a sequence profile
METHOD    for the family.
METHOD 2) Use created profile to search for related proteins in PDB
MODEL  1
PARENT 1sjs_
Q 88 E 67
V 89 I 68
K 90 Y 69
F 91 T 70
K 92 G 71
L 93 E 72
G 94 K 73
D 95 S 74
Y 96 T 75
L 97 Q 76
M 98 V 77
F 99 Y 78
G 100 G 79
P 101 Q 80
E 102 D 81
T 103 V 82
R 104 W 83
I 106 L 84
P 107 P 85
M 108 A 86
S 109 E 87
I 110 T 88
L 111 L 89
N 112 D 90
E 113 L 91
M 114 I 92
P 115 R 93
E 117 E 94
Q 118 Y 95
K 119 R 96
I 120 V 97
R 121 A 98
I 122 I 99
P 123 P 106
M 124 V 107
T 125 G 108
A 126 G 109
N 127 G 110
S 128 I 111
R 129 R 112
S 130 S 113
M 131 L 114
N 132 N 115
L 133 V 116
S 134 A 117
N 135 L 118
S 136 R 119
V 137 Q 120
A 138 E 121
V 139 L 122
T 140 D 123
V 141 L 124
Y 142 Y 125
E 143 I 126
A 144 C 127
W 145 L 128
R 146 R 129
Q 147 P 130
L 148 V 131
G 149 R 132
Y 150 Y 133
K 151 Y 134
G 152 Q 135
A 153 G 136
V 154 T 137
N 155 P 138
L 156 S 139
P 157 P 140
TER
END

