
PFRMAT AL
TARGET T0093
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  5
PARENT 4ake_B
L 2 M 1
D 3 R 2
I 4 I 3
V 5 I 4
L 6 L 5
Y 7 L 6
E 8 G 7
P 9 A 8
E 10 P 9
I 11 G 10
P 12 A 11
Q 13 G 12
N 14 K 13
T 15 G 14
G 16 T 15
N 17 Q 16
I 18 A 17
I 19 Q 18
R 20 F 19
L 21 I 20
C 22 M 21
A 23 E 22
N 24 K 23
T 25 Y 24
G 26 G 25
F 27 I 26
R 28 P 27
L 29 Q 28
H 30 I 29
L 31 L 35
I 32 R 36
E 33 A 37
P 34 A 38
L 35 V 39
G 36 K 40
F 37 S 41
T 38 G 42
W 39 S 43
D 40 E 44
D 41 L 45
K 42 G 46
R 43 K 47
L 44 Q 48
R 45 A 49
R 46 K 50
S 47 D 51
G 48 I 52
L 49 M 53
D 50 D 54
Y 51 A 55
H 52 G 56
E 53 K 57
F 54 L 58
A 55 V 59
E 56 T 60
I 57 E 62
K 58 L 63
R 59 V 64
H 60 I 65
K 61 A 66
T 62 L 67
F 63 V 68
E 64 K 69
A 65 E 70
F 66 R 71
L 67 I 72
E 68 A 73
S 69 Q 74
E 70 E 75
K 71 D 76
P 72 C 77
K 73 R 78
R 74 N 79
L 75 G 80
F 76 F 81
A 77 L 82
L 78 L 83
T 79 T 89
T 80 I 90
K 81 P 91
G 82 Q 92
C 83 A 93
P 84 D 94
A 85 A 95
H 86 M 96
S 87 K 97
Q 88 E 98
V 89 A 99
K 90 G 100
F 91 I 101
K 92 N 102
L 93 V 103
G 94 D 104
D 95 Y 105
Y 96 V 106
L 97 L 107
M 98 E 108
F 99 F 109
I 106 V 111
P 107 P 112
M 108 D 113
S 109 E 114
I 110 L 115
L 111 I 116
N 112 V 117
E 113 D 118
TER
END

