
PFRMAT AL
TARGET T0094
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.96 
REMARK CONFIDENCE: GUESS     (50% confidence [ ZSCORE>=3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd2dlda2
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 2dld_A
K   6     M     1 
D   7     T     2 
V   8     K     3 
Y   9     V     4 
S  10     F     5 
V  11     A     6 
W  12     Y     7 
A  13     A     8 
L  14     I     9 
P  15     R    10 
D  16     K    11 
E  17     D    12 
E  18     E    13 
E  20     E    14 
P  21     P    15 
R  22     F    16 
F  23     L    17 
K  24     N    18 
K  25     E    19 
L  26     W    20 
M  27     K    21 
E  28     E    22 
A  29     A    23 
L  30     H    24 
R  31     K    25 
S  32     D    26 
V  43     I    27 
T  44     D    28 
V  45     V    29 
A  46     D    30 
V  47     Y    31 
S  48     T    32 
A  49     D    33 
Y  50     K    34 
L  51     L    35 
T  52     L    36 
A  53     T    37 
D  54     P    38 
E  55     E    39 
A  56     T    40 
K  57     A    41 
K  58     K    42 
M  59     L    43 
F  60     A    44 
E  61     K    45 
S  62     G    46 
A  63     A    47 
T  79     D    48 
G  80     G    49 
T  81     V    50 
F  82     V    51 
F  83     V    52 
F  84     Y    53 
Q  85     Q    54 
L  90     Q    55 
L  91     L    56 
Q  92     D    57 
T  93     Y    58 
T  94     T    59 
P  95     A    60 
E  96     D    61 
V  97     T    62 
M  98     L    63 
E  99     Q    64 
A 100     A    65 
G 101     L    66 
E 102     A    67 
T 114     D    68 
P 115     A    69 
Y 116     G    70 
M 117     V    71 
P 118     T    72 
H 119     K    73 
L 120     M    74 
S 121     S    75 
L 122     L    76 
L 123     R    77 
Y 124     N    78 
A 125     V    79 
E 126     G    80 
L 127     V    81 
T 128     D    82 
E 129     N    83 
E 130     I    84 
E 131     D    85 
K 132     M    86 
K 133     D    87 
N 134     K    88 
A 135     A    89 
Q 136     K    90 
E 137     E    91 
K 138     L    92 
A 139     G    93 
Y 140     F    94 
T 141     Q    95 
L 142     I    96 
D 143     T    97 
S 144     N    98 
S 145     V   101 
L 146     Y   102 
D 147     S   103 
G 148     Y   301 
L 149     T   302 
S 150     T   303 
F 151     H   304 
R 152     A   305 
L 153     V   306 
N 154     R   307 
R 155     N   308 
L 156     M   309 
A 157     V   310 
L 158     V   311 
C 159     K   312 
K 160     A   313 
T 161     F   314 
D 162     N   315 
T 163     N   316 
E 164     N   317 
D 165     L   318 
K 166     K   319 
T 167     L   320 
L 168     I   321 
E 169     N   322 
T 170     G   323 
W 171     E   324 
E 172     K   325 
T 173     P   326 
V 174     D   327 
A 175     S   328 
V 176     P   329 
C 177     V   330 
N 178     A   331 
L 179     L   332 
N 180     N   333 
P 181     K   334 
TER
END

