
PFRMAT AL
TARGET T0094
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  3
PARENT 1cm0_A
REMARK M 1 M 1
E 2 K 492
E 3 V 493
V 4 I 494
K 5 E 495
K 6 F 496
D 7 H 497
V 8 V 498
Y 9 V 499
S 10 G 500
V 11 N 501
W 12 S 502
A 13 L 503
L 14 N 504
P 15 Q 505
D 16 K 506
E 17 P 507
E 18 N 508
S 19 K 509
E 20 K 510
R 22 I 511
F 23 L 512
K 24 M 513
K 25 W 514
L 26 L 515
M 27 V 516
A 29 G 517
L 30 L 518
R 31 Q 519
S 32 N 520
E 33 V 521
F 34 F 522
T 35 S 523
G 36 H 524
P 37 P 527
R 38 R 528
F 39 F 539
V 40 D 540
P 41 P 541
H 42 H 543
V 43 K 544
T 44 T 545
V 45 L 546
A 46 A 547
V 47 L 548
S 48 I 549
A 49 K 550
Y 50 D 551
L 51 G 552
T 52 R 553
A 53 V 554
D 54 I 555
E 55 G 556
A 56 G 557
K 58 R 561
M 59 M 562
F 60 F 563
E 61 P 564
S 62 S 565
A 63 Q 566
C 64 G 567
D 65 F 568
G 66 T 569
L 67 E 570
K 68 I 571
A 69 V 572
Y 70 F 573
T 71 C 574
A 72 A 575
T 73 V 576
T 81 T 577
F 82 S 578
F 83 N 579
F 84 E 580
Q 85 Q 581
V 97 V 582
M 98 K 583
E 99 G 584
A 100 Y 585
G 101 G 586
E 102 T 587
H 103 H 588
C 104 L 589
K 105 M 590
N 106 N 591
H 107 H 592
F 108 L 593
N 109 K 594
C 110 E 595
S 111 Y 596
T 112 H 597
T 113 I 598
T 114 K 599
P 115 H 600
Y 116 D 601
M 117 I 602
P 118 L 603
H 119 N 604
L 120 F 605
L 122 L 606
L 123 T 607
Y 124 Y 608
A 125 A 609
E 126 D 610
L 127 E 611
T 128 Y 612
E 129 A 613
E 130 I 614
E 131 G 615
K 132 K 618
K 133 K 619
N 134 Q 620
A 135 G 621
Q 136 F 622
E 137 S 623
K 138 K 624
A 139 E 625
Y 140 I 626
T 141 K 627
L 142 I 628
D 143 P 629
S 144 K 630
S 145 T 631
R 155 K 632
L 156 Y 633
A 157 V 634
L 158 G 635
C 159 Y 636
K 160 I 637
T 161 K 638
D 162 D 639
T 163 Y 640
E 164 E 641
D 165 G 642
K 166 A 643
T 167 T 644
L 168 L 645
E 169 M 646
T 170 G 647
C 177 C 648
N 178 E 649
L 179 L 650
N 180 N 651
P 181 P 652
TER
END

