
PFRMAT AL
TARGET T0095
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 2
PARENT 1dn1_B
D  388 D 27
H  389 R 28
V  390 F 29
S  391 M 30
D  392 D 31
S  393 E 32
F  394 F 33
L  395 F 34
E  396 E 35
T  397 Q 36
N  398 V 37
V  399 E 38
P  400 E 39
L  401 I 40
L  402 R 41
V  403 G 42
L  404 F 43
I  405 I 44
E  406 D 45
A  407 K 46
A  408 I 47
E  413 A 48
K  414 E 49
E  415 N 50
V  416 V 51
K  417 E 52
E  418 E 53
V  422 V 54
F  423 K 55
R  424 R 56
E  425 K 57
H  426 H 58
A  427 S 59
N  428 A 60
L  436 I 61
A  437 L 62
C  438 A 63
S  439 S 64
I  440 P 65
S  441 N 66
N  442 P 67
N  443 D 68
E  444 E 69
E  445 K 70
G  446 T 71
V  447 K 72
K  448 E 73
L  449 E 74
V  450 L 75
R  451 E 76
M  452 E 77
S  453 L 78
A  454 M 79
S  455 S 80
Q  456 D 81
L  457 I 82
E  458 K 83
A  459 K 84
L  460 T 85
C  461 A 86
P  462 N 87
Q  463 K 88
V  464 V 89
L  469 R 90
A  470 S 91
L  471 K 92
A  472 L 93
A  473 K 94
K  474 S 95
P  475 I 96
Q  476 E 97
S  477 Q 98
K  478 S 99
L  479 I 100
A  480 E 101
Q  481 Q 102
E  482 E 103
D  485 E 104
L  486 G 105
F  487 L 106
K  488 N 107
E  489 R 108
Q  490 S 109
W  491 S 110
E  492 A 111
K  493 D 112
R  496 L 113
V  497 R 114
L  498 I 115
T  499 R 116
D  500 K 117
V  502 T 118
D  503 Q 119
D  504 H 120
I  505 S 121
T  506 T 122
S  507 L 123
I  508 S 124
D  509 R 125
D  510 K 126
F  511 F 127
L  512 V 128
A  513 E 129
V  514 V 130
S  515 S 132
E  516 E 133
N  517 N 135
H  518 A 136
I  519 T 137
L  520 Q 138
E  521 S 139
D  522 D 140
V  523 Y 141
N  524 E 143
K  525 R 144
C  526 C 145
V  527 K 146
I  528 G 147
A  529 R 148
L  530 I 149
Q  531 Q 150
E  532 T 159
K  533 T 160
D  534 T 161
V  535 S 162
D  536 E 163
G  537 E 164
L  538 L 165
D  539 E 166
R  540 D 167
T  541 M 168
A  542 L 169
G  543 E 170
A  544 S 171
I  545 I 187
R  546 S 188
G  547 K 189
R  548 Q 190
A  549 A 191
A  550 L 192
R  551 S 193
V  552 E 194
I  553 I 195
H  554 E 196
V  555 T 197
V  556 R 198
T  557 H 199
S  558 S 200
E  559 E 201
T  569 I 202
E  570 I 203
K  571 K 204
V  572 L 205
L  573 E 206
E  574 N 207
A  575 S 208
T  576 I 209
K  577 R 210
L  578 E 211
L  579 L 212
S  580 H 213
N  581 D 214
T  582 M 215
V  583 F 216
M  584 M 217
P  585 M 221
R  586 L 222
F  587 V 223
T  588 E 224
E  589 S 225
Q  590 Q 226
V  591 I 233
E  592 E 234
A  593 Y 235
A  594 N 236
V  595 V 237
E  596 E 238
A  597 H 239
L  598 A 240
S  599 V 241
S  600 D 242
D  601 Y 243
P  602 V 244
A  603 E 245
Q  604 R 246
P  605 A 247
M  606 V 248
TER
END

