
PFRMAT AL
TARGET T0095
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 4
PARENT 1cun_A
V  390 M 7
S  391 V 8
D  392 H 9
S  393 Q 10
F  394 F 11
L  395 F 12
E  396 D 17
T  397 E 18
N  398 E 19
V  399 S 20
P  400 W 21
L  401 I 22
L  402 K 23
V  403 E 24
L  404 K 25
I  405 K 26
E  406 L 27
A  407 L 28
A  408 V 29
K  409 S 30
N  410 S 31
G  411 E 32
N  412 D 33
E  413 G 35
K  414 R 36
E  415 D 37
V  416 L 38
K  417 T 39
E  418 G 40
Y  419 V 41
A  420 Q 42
Q  421 N 43
V  422 L 44
F  423 R 45
R  424 K 46
E  425 K 47
H  426 H 48
A  427 K 49
N  428 R 50
K  429 L 51
L  430 E 52
I  431 A 53
E  432 E 54
V  433 L 55
A  434 A 56
N  435 A 57
L  436 H 58
E  444 E 59
E  445 P 60
G  446 A 61
V  447 I 62
K  448 Q 63
L  449 S 64
V  450 V 65
R  451 L 66
M  452 D 67
S  453 T 68
A  454 G 69
S  455 K 70
Q  456 K 71
L  457 L 72
E  458 S 73
A  459 D 74
L  460 D 75
C  461 N 76
P  462 T 77
Q  463 I 78
V  464 G 79
I  465 K 80
N  466 E 81
A  467 E 82
A  468 I 83
L  469 Q 84
A  470 Q 85
L  471 R 86
A  472 L 87
A  473 A 88
L  479 Q 89
A  480 F 90
Q  481 V 91
E  482 D 92
N  483 H 93
M  484 W 94
D  485 K 95
L  486 E 96
F  487 L 97
K  488 K 98
E  489 Q 99
Q  490 L 100
W  491 A 101
E  492 A 102
K  493 A 103
Q  494 R 104
V  495 G 105
R  496 Q 106
V  497 R 107
L  498 L 108
T  499 E 109
D  500 E 110
A  501 S 111
V  502 L 112
D  503 E 113
D  504 N 120
I  505 V 121
T  506 E 122
S  507 E 123
I  508 E 124
D  509 E 125
D  510 A 126
F  511 W 127
L  512 I 128
A  513 N 129
V  514 E 130
S  515 K 131
E  516 M 132
N  517 T 133
H  518 L 134
I  519 V 135
L  520 Y 140
E  521 G 141
D  522 D 142
V  523 T 143
N  524 L 144
K  525 A 145
C  526 A 146
V  527 I 147
I  528 Q 148
A  529 G 149
L  530 L 150
Q  531 L 151
E  532 K 152
K  533 K 153
V  535 H 154
D  536 E 155
G  537 A 156
L  538 F 157
D  539 E 158
R  540 T 159
T  541 D 160
A  542 F 161
G  543 T 162
A  544 V 163
I  545 H 164
R  546 K 165
G  547 D 166
R  548 R 167
A  549 V 168
A  550 N 169
R  551 D 170
V  552 V 171
I  553 C 172
H  554 A 173
V  555 N 174
V  556 G 175
T  557 E 176
S  558 D 177
E  559 L 178
M  560 I 179
D  561 K 180
N  562 K 181
Y  563 N 182
E  564 N 183
P  565 H 184
G  566 H 185
V  567 V 186
E  570 E 187
K  571 N 188
V  572 I 189
L  573 T 190
E  574 A 191
A  575 K 192
T  576 M 193
K  577 K 194
L  578 G 195
L  579 L 196
S  580 K 197
N  581 G 198
T  582 K 199
V  583 V 200
M  584 L 203
P  585 E 204
R  586 K 205
F  587 A 206
T  588 A 207
E  589 A 208
Q  590 Q 209
V  591 R 210
E  592 K 211
A  593 A 212
A  594 K 213
V  595 L 214
E  596 D 215
A  597 E 216
L  598 N 217
S  599 S 218
S  600 A 219
TER
END

