
PFRMAT AL
TARGET T0095
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1qqe_A
L  395 I 1
E  396 S 2
T  397 D 3
N  398 P 4
V  399 V 5
P  400 E 6
L  401 L 7
L  402 L 8
V  403 K 9
L  404 R 10
I  405 A 11
E  406 E 12
A  407 K 13
A  408 K 14
K  409 P 17
N  410 S 18
G  411 S 19
N  412 G 20
E  413 F 21
K  414 M 22
E  415 K 23
V  416 L 24
K  417 F 25
E  418 S 28
Y  419 D 29
A  420 S 30
Q  421 Y 31
V  422 K 32
F  423 F 33
R  424 E 34
E  425 E 35
H  426 A 36
A  427 A 37
N  428 D 38
K  429 L 39
L  430 C 40
I  431 V 41
E  432 Q 42
V  433 A 43
A  434 A 44
N  435 T 45
L  436 I 46
A  437 Y 47
C  438 R 48
S  439 L 49
I  440 R 50
S  441 K 51
N  442 E 52
N  443 L 53
E  444 N 54
E  445 L 55
G  446 A 56
V  447 G 57
K  448 D 58
L  449 S 59
V  450 F 60
R  451 L 61
M  452 K 62
S  453 A 63
A  454 A 64
S  455 D 65
Q  456 Y 66
L  457 Q 67
E  458 K 68
A  459 V 94
L  460 N 95
C  461 A 96
P  462 V 97
Q  463 D 98
V  464 S 99
I  465 L 100
N  466 E 101
A  467 N 102
A  468 A 103
L  469 I 104
A  470 Q 105
L  471 I 106
A  472 F 107
A  473 T 108
K  474 G 111
P  475 Q 112
Q  476 F 113
S  477 R 114
K  478 R 115
L  479 G 116
A  480 A 117
Q  481 N 118
E  482 F 119
N  483 K 120
M  484 F 121
D  485 E 122
L  486 L 123
F  487 G 124
K  488 E 125
E  489 I 126
Q  490 L 127
W  491 E 128
E  492 N 129
K  493 D 130
Q  494 A 137
V  495 I 138
R  496 D 139
V  497 C 140
L  498 Y 141
T  499 E 142
D  500 L 143
A  501 A 144
V  502 G 145
D  503 E 146
D  504 Q 150
I  505 D 151
T  506 Q 152
S  507 S 153
I  508 V 154
D  509 A 155
D  510 L 156
F  511 S 157
L  512 N 158
A  513 K 159
V  514 C 160
S  515 F 161
E  516 I 162
N  517 K 163
H  518 A 169
I  519 L 170
L  520 D 171
E  521 G 172
D  522 Q 173
V  523 Y 174
N  524 I 175
K  525 E 176
C  526 A 177
V  527 S 178
I  528 D 179
A  529 I 180
L  530 Y 181
Q  531 S 182
E  532 K 183
K  533 R 192
D  534 L 193
V  535 S 194
D  536 Q 195
G  537 W 196
L  538 S 197
D  539 L 198
R  540 K 199
T  541 D 200
A  542 Y 201
G  543 F 202
A  544 L 203
I  545 K 204
R  546 K 205
G  547 G 206
R  548 L 207
A  549 C 208
A  550 Q 209
R  551 L 210
V  552 A 211
I  553 A 212
H  554 A 215
V  555 V 216
V  556 A 217
T  557 A 218
S  558 A 219
E  559 R 220
M  560 T 221
D  561 L 222
N  562 Q 223
Y  563 E 224
E  564 G 225
P  565 Q 226
G  566 S 227
Y  568 E 237
T  569 S 238
E  570 N 239
K  571 F 240
V  572 L 241
L  573 K 242
E  574 S 243
A  575 L 244
T  576 I 245
K  577 D 246
L  578 A 247
L  579 V 248
S  580 N 249
N  581 E 250
T  582 G 251
V  583 D 252
M  584 S 253
P  585 E 254
R  586 Q 255
F  587 L 256
T  588 S 257
E  589 E 258
Q  590 H 259
V  591 C 260
E  592 K 261
A  593 E 262
A  594 F 263
V  595 D 264
E  596 N 265
A  597 F 266
L  598 M 267
S  599 R 268
S  600 L 269
D  601 D 270
P  602 K 271
M  606 W 272
D  607 K 273
E  608 I 274
N  609 T 275
E  610 I 276
F  611 L 277
I  612 N 278
D  613 K 279
A  614 I 280
S  615 K 281
R  616 E 282
L  617 S 283
V  618 I 284
Y  619 Q 285
D  620 Q 286
G  621 Q 287
I  622 E 288
R  623 D 289
D  624 D 290
TER
END

