
PFRMAT AL
TARGET T0095
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.36 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1ryt_1
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  4
PARENT 1ryt
D 388     K     2
H 389     S     3
V 390     L     4
S 391     K     5
D 392     G     6
S 393     S     7
I 465     R     8
N 466     T     9
A 467     E    10
A 468     K    11
L 469     N    12
A 470     I    13
L 471     L    14
A 472     T    15
A 473     A    16
K 474     F    17
P 475     A    18
Q 476     G    19
S 477     E    20
K 478     S    21
L 479     Q    22
A 480     A    23
Q 481     R    24
E 482     N    25
N 483     R    26
M 484     Y    27
D 485     N    28
L 486     Y    29
F 487     F    30
K 488     G    31
E 489     G    32
Q 490     Q    33
W 491     A    34
E 492     K    35
K 493     K    36
Q 494     D    37
D 504     G    38
I 505     F    39
T 506     V    40
S 507     Q    41
I 508     I    42
D 509     S    43
D 510     D    44
F 511     I    45
L 512     F    46
A 513     A    47
V 514     E    48
S 515     T    49
E 516     A    50
N 517     D    51
H 518     Q    52
I 519     E    53
L 520     R    54
E 521     E    55
D 522     H    56
V 523     A    57
N 524     K    58
K 525     R    59
C 526     L    60
V 527     F    61
I 528     K    62
A 529     F    63
L 530     L    64
Q 531     E    65
E 532     G    66
K 533     G    67
D 534     D    68
V 535     L    69
D 536     E    70
G 537     I    71
L 538     V    72
D 539     A    73
R 540     A    74
T 541     P    76
A 542     A    77
G 543     G    78
A 544     I    79
I 545     I    80
R 546     A    81
G 547     D    82
R 548     T    83
A 549     H    84
A 550     A    85
R 551     N    86
V 552     L    87
I 553     I    88
H 554     A    89
V 555     S    90
V 556     A    91
T 557     A    92
S 558     G    93
E 559     E    94
M 560     H    95
D 561     H    96
N 562     E    97
Y 563     Y    98
E 564     T    99
P 565     E   100
V 567     M   101
Y 568     Y   102
T 569     P   103
E 570     S   104
K 571     F   105
V 572     A   106
L 573     R   107
E 574     I   108
A 575     A   109
T 576     R   110
K 577     E   111
T 588     E   112
E 589     G   113
Q 590     Y   114
V 591     E   115
E 592     E   116
A 593     I   117
A 594     A   118
V 595     R   119
E 596     V   120
A 597     F   121
L 598     A   122
S 599     S   123
S 600     I   124
D 601     A   125
P 602     V   126
A 603     A   127
Q 604     E   128
P 605     E   129
M 606     F   130
D 607     H   131
E 608     E   132
N 609     K   133
E 610     R   134
F 611     F   135
I 612     L   136
D 613     D   137
A 614     F   138
S 615     A   139
R 616     R   140
L 617     N   141
V 618     I   142
Y 619     K   143
D 620     E   144
G 621     G   145
I 622     R   146
R 623     V   147
TER
END

