
PFRMAT AL
TARGET T0095
AUTHOR 1205-3016-5241
METHOD Using a database which X'ed out sequence regions within coiled-coils,
METHOD transmembrane, and low entropy, SENSER was able to identify a relationship
METHOD between alpha(E)-catenin fragment and the F chain of HEAT SHOCK LOCUS U
METHOD through recursive searching. An alignment
METHOD was automatically generated with HMMer using profiles
METHOD of the target and pdb families.
MODEL 1
PARENT 1dooF
F 423    S   2
R 424    E   3
E 425    M   4
H 426    T   5
A 427    P   6
N 428    R   7
K 429    E   8
L 430    I   9
I 431    V  10
E 432    S  11
V 433    E  12
A 434    L  13
N 435    D  14
L 436    K  15
A 437    H  16
C 438    I  17
S 439    I  18
I 440    G  19
S 441    Q  20
N 442    D  21
N 443    N  22
E 444    A  23
E 445    K  24
G 446    R  25
V 447    S  26
K 448    V  27
L 449    A  28
V 450    I  29
R 451    A  30
M 452    L  31
S 453    R  32
A 454    N  33
S 455    R  34
Q 456    W  35
L 457    R  36
E 458    R  37
A 459    M  38
L 460    Q  39
C 461    L  40
P 462    N  41
Q 463    E  42
V 464    E  43
I 465    L  44
N 466    R  45
A 467    H  46
A 468    E  47
L 469    V  48
A 470    T  49
L 471    P  50
A 472    K  51
A 473    N  52
K 474    I  53
P 475    L  54
Q 476    M  55
S 477    I  56
K 478    G  57
L 479    P  58
A 480    T  59
Q 481    G  60
E 482    V  61
N 483    G  62
M 484    K  63
D 485    T  64
L 486    E  65
F 487    I  66
K 488    A  67
E 489    R  68
Q 490    R  69
W 491    L  70
E 492    A  71
K 493    K  72
Q 494    L  73
V 495    A  74
R 496    N  75
V 497    A  76
L 498    P  77
T 499    F  78
D 500    I  79
A 501    K  80
V 502    V  81
D 503    E  82
D 504    A  83
I 505    T  84
T 506    K  85
S 507    F  86
I 508    T  87
D 509    E  88
D 510    V  89
A 513    G  90
V 514    Y  91
S 515    V  92
E 516    G  93
N 517    K  94
H 518    E  95
I 519    V  96
L 520    D  97
E 521    S  98
D 522    D 105
V 523    A 106
N 524    A 107
K 525    V 108
C 526    K 109
V 527    M 110
I 528    V 111
A 529    R 112
L 530    V 113
Q 531    Q 114
E 532    A 115
K 533    I 116
D 534    E 117
V 535    K 118
D 536    N 119
R 548    R 120
A 549    Y 121
A 550    R 122
R 551    A 123
D 561    E 124
N 562    E 125
Y 563    L 126
E 564    A 127
P 565    E 128
G 566    E 129
V 567    R 130
Y 568    I 131
T 569    L 132
E 570    D 133
K 571    V 134
V 572    L 135
L 573    I 136
E 574    P 137
A 575    P 138
T 576    A 139
K 577    K 140
L 578    N 142
L 579    G 144
S 580    Q 145
N 581    T 146
T 582    E 147
V 583    Q 148
M 584    Q 149
P 585    Q 150
R 586    E 151
F 587    P 152
T 588    S 153
E 589    A 154
Q 590    A 155
V 591    R 156
E 592    Q 157
A 593    A 158
A 594    F 159
V 595    R 160
E 596    K 161
A 597    K 162
L 598    L 163
S 599    R 164
S 600    E 165
D 601    G 166
TER
END

