
PFRMAT AL
TARGET T0097
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.02 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1a0p_1
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  2
PARENT 1a0p
S 139     Q     3
S 140     D     4
R 141     L     5
E 142     A     6
A 143     R     7
R 144     I     8
Q 145     E     9
A 146     Q    10
I 147     F    11
L 148     L    12
K 149     D    13
Q 150     A    14
G 151     L    15
Q 152     W    16
D 153     L    17
G 154     E    18
L 155     K    19
S 156     N    20
G 157     L    21
V 158     A    22
K 159     E    23
E 160     N    24
T 161     T    25
D 162     L    26
K 163     N    27
K 164     A    28
W 165     Y    29
A 166     R    30
S 167     R    31
Q 168     D    32
Y 169     L    33
L 170     S    34
K 171     M    35
I 172     M    36
M 173     V    37
G 174     E    38
K 175     W    39
I 176     L    40
L 177     H    41
D 178     H    42
Q 179     R    43
G 180     G    44
E 181     L    45
D 182     T    46
F 183     L    47
P 184     A    48
A 185     T    49
S 186     A    50
E 187     Q    51
L 188     S    52
A 189     D    53
R 190     D    54
I 191     L    55
S 192     Q    56
K 193     A    57
L 194     L    58
I 195     L    59
E 196     A    60
N 197     E    61
K 198     R    62
M 199     L    63
S 200     S    71
E 201     S    72
G 202     A    73
K 203     R    74
K 204     L    75
E 205     L    76
E 206     S    77
L 207     A    78
Q 208     V    79
R 209     R    80
S 210     R    81
I 213     L    82
L 214     F    83
T 215     Q    84
A 216     Y    85
F 217     L    86
R 218     Y    87
K 219     R    88
K 220     E    89
G 221     K    90
A 222     F    91
E 223     R    92
K 224     E    93
E 225     D    94
E 226     D    95
L 227     P    96
TER
END

