
PFRMAT AL
TARGET T0097
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 2
PARENT 2spc_A
G  123 Q 0
C  124 N 1
L  125 L 2
P  126 D 3
Y  128 L 4
D  129 Q 5
A  130 L 6
L  131 Y 7
A  132 M 8
G  133 R 9
Q  134 D 10
F  135 C 11
I  136 E 12
E  137 L 13
A  138 A 14
S  139 E 15
S  140 S 16
R  141 W 17
E  142 S 19
A  143 A 20
R  144 R 21
Q  145 E 22
A  146 A 23
I  147 F 24
L  148 L 25
K  149 N 26
Q  150 A 27
G  151 D 28
Q  152 D 29
D  153 D 30
G  154 A 31
L  155 G 34
S  156 G 35
G  157 N 36
V  158 V 37
K  159 E 38
E  160 A 39
T  161 L 40
D  162 I 41
K  163 K 42
K  164 K 43
W  165 H 44
A  166 E 45
S  167 D 46
Q  168 K 49
Y  169 A 50
L  170 I 51
K  171 N 52
I  172 G 53
M  173 H 54
G  174 E 55
K  175 Q 56
I  176 K 57
L  177 I 58
D  178 A 59
Q  179 A 60
G  180 L 61
E  181 Q 62
D  182 T 63
F  183 V 64
A  185 A 65
S  186 D 66
E  187 Q 67
L  188 L 68
A  189 I 69
R  190 A 70
I  191 Q 71
S  192 N 72
K  193 H 73
L  194 Y 74
I  195 A 75
E  196 S 76
N  197 N 77
K  198 L 78
M  199 V 79
S  200 D 80
E  201 E 81
G  202 K 82
K  203 R 83
K  204 K 84
E  205 Q 85
E  206 V 86
L  207 L 87
Q  208 E 88
R  209 R 89
S  210 W 90
L  211 R 91
N  212 H 92
I  213 L 93
L  214 K 94
T  215 E 95
A  216 G 96
F  217 L 97
R  218 I 98
K  219 E 99
K  220 K 100
G  221 R 101
A  222 S 102
E  223 R 103
K  224 L 104
E  225 G 105
E  226 D 106
TER
END

