
PFRMAT AL
TARGET T0097
AUTHOR 3092-8926-3558
METHOD PDB BLAST http://bioinformatics.ljcrf.edu/pdb_blast/
METHOD 1) Use PSI-Blast to collect homologs and create a sequence profile
METHOD    for the family.
METHOD 2) Use created profile to search for related proteins in PDB
MODEL  2
PARENT 1lis_
D 162 Q 59
K 163 T 60
K 164 H 61
W 165 W 62
A 166 A 63
S 167 N 64
Q 168 Y 65
Y 169 M 66
L 170 L 67
K 171 W 68
I 172 I 69
M 173 N 70
G 174 K 71
K 175 K 72
I 176 I 73
L 177 D 74
D 178 A 75
Q 179 L 76
G 180 G 77
E 181 R 78
D 182 T 79
F 183 P 80
P 184 V 81
A 185 V 82
S 186 G 83
E 187 D 84
L 188 Y 85
A 189 T 86
R 190 R 87
I 191 L 88
S 192 G 89
K 193 A 90
L 194 E 91
I 195 I 92
E 196 G 93
N 197 R 94
K 198 R 95
M 199 I 96
S 200 D 97
E 201 M 98
G 202 A 99
K 203 Y 100
K 204 F 101
E 205 Y 102
E 206 D 103
L 207 F 104
Q 208 L 105
R 209 K 106
S 210 D 107
L 211 K 108
N 212 N 109
I 213 M 110
L 214 I 111
T 215 P 112
A 216 K 113
F 217 Y 114
R 218 L 115
K 219 P 116
K 220 Y 117
G 221 M 118
A 222 E 119
E 223 E 120
TER
END

