
PFRMAT AL
TARGET T0098
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=5.26 
REMARK CONFIDENCE: LIKELY    (95% confidence [ ZSCORE>=5.0 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1gln_1
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 1gln
D 139     V   321
N 140     L   322
K 141     S   323
P 142     L   324
K 143     E   325
N 144     E   326
L 145     V   327
D 146     A   328
A 147     E   329
S 148     R   330
I 149     V   331
T 150     K   332
S 151     P   333
I 152     F   334
I 153     L   335
H 154     R   336
E 155     E   337
I 156     A   338
G 157     G   339
V 158     L   340
P 159     S   341
I 162     W   342
K 163     E   343
G 164     S   344
Y 165     E   345
L 166     A   346
Y 167     Y   347
L 168     L   348
R 169     R   349
E 170     R   350
A 171     A   351
I 172     V   352
A 173     E   353
M 174     L   354
V 175     M   355
Y 176     R   356
H 177     P   357
D 178     K   386
I 179     L   387
E 180     E   388
L 181     E   389
L 182     G   390
G 183     L   391
S 184     P   392
I 185     L   393
T 186     L   394
K 187     K   395
V 188     E   396
L 189     L   397
Y 190     Y   398
P 191     P   399
D 192     R   400
I 193     L   401
A 194     R   402
K 195     A   403
K 196     Q   404
Y 197     E   405
N 198     E   406
T 199     W   407
T 200     T   408
A 201     E   409
S 202     A   410
R 203     A   411
V 204     L   412
E 205     E   413
R 206     A   414
A 207     L   415
I 208     L   416
R 209     R   417
H 210     G   418
A 211     F   419
I 212     A   420
E 213     A   421
V 214     E   422
S 217     K   423
R 218     G   424
G 219     V   425
N 220     K   426
L 221     L   427
E 222     G   428
S 223     Q   429
I 224     V   430
S 225     A   431
S 226     Q   432
L 227     P   433
F 228     L   434
G 229     R   435
Y 230     A   436
T 231     A   437
V 232     L   438
S 233     T   439
V 234     G   440
S 235     S   441
K 236     L   442
A 237     E   443
K 238     T   444
P 239     P   445
T 240     G   446
N 241     L   447
S 242     F   448
E 243     E   449
F 244     I   450
I 245     L   451
A 246     A   452
M 247     L   453
V 248     L   454
A 249     G   455
D 250     K   456
K 251     E   457
L 252     R   458
R 253     R   462
L 254     L   463
E 255     E   464
H 256     R   465
K 257     A   466
A 258     L   467
S 259     A   468
TER
END

