
PFRMAT AL
TARGET T0098
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.22 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1c52
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  4
PARENT 1c52
D 139     Q     1
N 140     A     2
K 141     D     3
P 142     G     4
K 143     A     5
N 144     K     6
L 145     I     7
D 146     Y     8
A 147     A     9
S 148     Q    10
I 149     C    11
T 150     A    12
S 151     G    13
I 152     C    14
I 153     H    15
H 154     Q    16
E 155     Q    17
I 156     N    18
G 157     G    19
V 158     L    29
P 159     A    30
A 160     G    31
H 161     H    32
I 162     V    33
K 163     A    34
G 164     E    35
Y 165     I    36
L 166     L    37
Y 167     A    38
L 168     K    39
R 169     R    43
E 170     E    44
A 171     Y    45
I 172     L    46
A 173     I    47
M 174     L    48
V 175     V    49
Y 176     L    50
H 177     L    51
D 178     Y    52
E 180     G    53
L 181     L    54
L 182     Q    55
G 183     G    56
S 184     Q    57
I 185     I    58
T 186     E    59
K 187     G    62
V 188     M    63
L 189     K    64
Y 190     Y    65
P 191     N    66
D 192     G    67
I 193     V    68
A 194     M    69
K 195     S    70
K 196     S    71
Y 197     F    72
N 198     A    73
T 199     Q    74
T 200     L    75
A 201     D    77
S 202     E    78
R 203     E    79
V 204     I    80
E 205     A    81
R 206     A    82
A 207     V    83
I 208     L    84
R 209     N    85
H 210     H    86
A 211     I    87
I 212     A    88
E 213     T    89
V 214     A    90
A 215     W    91
W 216     G    92
S 217     D    93
R 218     A    94
G 219     K    95
N 220     K    96
L 221     V    97
E 222     K    98
S 223     G    99
I 224     F   100
S 225     K   101
S 226     P   102
L 227     F   103
F 228     T   104
G 229     A   105
Y 230     E   106
T 231     E   107
V 232     V   108
S 233     K   109
V 234     K   110
S 235     L   111
K 236     R   112
A 237     A   113
K 238     K   114
P 239     K   115
T 240     L   116
N 241     T   117
S 242     P   118
E 243     Q   119
F 244     Q   120
I 245     V   121
A 246     L   122
M 247     A   123
V 248     E   124
A 249     R   125
D 250     K   126
K 251     K   127
L 252     L   128
R 253     G   129
L 254     L   130
E 255     K   131
TER
END

